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ASB7 ankyrin repeat and SOCS box containing 7 [ Trachemys scripta elegans ]

Gene ID: 117884174, updated on 19-Mar-2024

Summary

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Gene symbol
ASB7
Gene description
ankyrin repeat and SOCS box containing 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 10 NC_048307.1 (78000240..78041387)

Chromosome 10 - NC_048307.1Genomic Context describing neighboring genes Neighboring gene ceramide synthase 3 Neighboring gene lines homolog 1 Neighboring gene leucine rich repeat kinase 1 Neighboring gene chondroitin sulfate synthase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048307.1 Chromosome 10 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048307.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    78000240..78041387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034784352.1 → XP_034640243.1  ankyrin repeat and SOCS box protein 7

    Conserved Domains (4) summary
    PHA02884
    Location:184 → 314
    PHA02884; ankyrin repeat protein; Provisional
    COG0666
    Location:7 → 195
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03726
    Location:273 → 317
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:81 → 114
    ANK; ANK repeat [structural motif]

  2. XM_034784355.1 → XP_034640246.1  ankyrin repeat and SOCS box protein 7

    Conserved Domains (4) summary
    PHA02884
    Location:184 → 314
    PHA02884; ankyrin repeat protein; Provisional
    COG0666
    Location:7 → 195
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03726
    Location:273 → 317
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:81 → 114
    ANK; ANK repeat [structural motif]

  3. XM_034784354.1 → XP_034640245.1  ankyrin repeat and SOCS box protein 7

    Conserved Domains (4) summary
    PHA02884
    Location:184 → 314
    PHA02884; ankyrin repeat protein; Provisional
    COG0666
    Location:7 → 195
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03726
    Location:273 → 317
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:81 → 114
    ANK; ANK repeat [structural motif]

  4. XM_034784357.1 → XP_034640248.1  ankyrin repeat and SOCS box protein 7

    Conserved Domains (4) summary
    PHA02884
    Location:184 → 314
    PHA02884; ankyrin repeat protein; Provisional
    COG0666
    Location:7 → 195
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03726
    Location:273 → 317
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:81 → 114
    ANK; ANK repeat [structural motif]

  5. XM_034784356.1 → XP_034640247.1  ankyrin repeat and SOCS box protein 7

    Conserved Domains (4) summary
    PHA02884
    Location:184 → 314
    PHA02884; ankyrin repeat protein; Provisional
    COG0666
    Location:7 → 195
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03726
    Location:273 → 317
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:81 → 114
    ANK; ANK repeat [structural motif]

  6. XM_034784353.1 → XP_034640244.1  ankyrin repeat and SOCS box protein 7

    Conserved Domains (4) summary
    PHA02884
    Location:184 → 314
    PHA02884; ankyrin repeat protein; Provisional
    COG0666
    Location:7 → 195
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03726
    Location:273 → 317
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:81 → 114
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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