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anapc7 anaphase promoting complex subunit 7 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108878130, updated on 10-Apr-2024

Summary

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Gene symbol
anapc7
Gene description
anaphase promoting complex subunit 7
See related
EnsemblRapid:ENSLCAG00010027774
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG13
Exon count:
11
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG13 NC_066845.1 (19779212..19784592, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017367222.1 (4350509..4355901)

Linkage Group LG13 - NC_066845.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 81 homolog Neighboring gene ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a Neighboring gene ubiquitin-conjugating enzyme E2 G1 Neighboring gene RAD9 checkpoint clamp component B Neighboring gene protein phosphatase targeting COQ7 a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anaphase-promoting complex subunit 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066845.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    19779212..19784592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018668505.2 → XP_018524021.1  anaphase-promoting complex subunit 7

    UniProtKB/TrEMBL
    A0A4W6G6X1, A0A4W6G8R8
    Related
    ENSLCAP00010059631.1, ENSLCAT00010061247.2
    Conserved Domains (2) summary
    TIGR02917
    Location:207 → 509
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:338 → 368
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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