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ankrd13a ankyrin repeat domain 13A [ Callorhinchus milii (elephant shark) ]

Gene ID: 103184033, updated on 11-Mar-2024

Summary

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Gene symbol
ankrd13a
Gene description
ankyrin repeat domain 13A
See related
Ensembl:ENSCMIG00000015786
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704749.1 (10602661..10614758, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890144.1 (2431257..2443241)

NW_024704749.1Genomic Context describing neighboring genes Neighboring gene synaptic vesicle 2-related protein Neighboring gene solute carrier family 6 member 4b Neighboring gene G protein-coupled receptor kinase interacting ArfGAP 2a Neighboring gene trichoplein, keratin filament binding

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 13A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704749.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    10602661..10614758 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007901856.2 → XP_007900047.1  ankyrin repeat domain-containing protein 13A

    UniProtKB/TrEMBL
    A0A4W3JHP8
    Related
    ENSCMIP00000037558.1
    Conserved Domains (4) summary
    cd00204
    Location:6 → 98
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam11904
    Location:156 → 472
    GPCR_chapero_1; GPCR-chaperone
    pfam13637
    Location:41 → 90
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:40 → 71
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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