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ADAM23 ADAM metallopeptidase domain 23 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102409864, updated on 10-Mar-2024

Summary

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Gene symbol
ADAM23
Gene description
ADAM metallopeptidase domain 23
See related
EnsemblRapid:ENSBALG00030039785
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
27
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 2 NC_059158.1 (146845931..147046193)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 2 NC_058344.1 (146080763..146226799)

Chromosome 2 - NC_059158.1Genomic Context describing neighboring genes Neighboring gene chemerin chemokine-like receptor 2 Neighboring gene zinc finger DBF-type containing 2 Neighboring gene cytochrome c oxidase subunit 7A2, mitochondrial Neighboring gene family with sequence similarity 237 member A Neighboring gene dystrotelin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
disintegrin and metalloproteinase domain-containing protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059158.1 Reference NDDB_SH_1 Primary Assembly

    Range
    146845931..147046193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045164558.1 → XP_045020493.1  disintegrin and metalloproteinase domain-containing protein 23 isoform X2

    Related
    ENSBALP00030073413.1, ENSBALT00030110048.1
    Conserved Domains (4) summary
    smart00050
    Location:512 → 586
    DISIN; Homologues of snake disintegrins
    smart00608
    Location:588 → 727
    ACR; ADAM Cysteine-Rich Domain
    pfam01421
    Location:300 → 497
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:127 → 249
    Pep_M12B_propep; Reprolysin family propeptide

  2. XM_045164561.1 → XP_045020496.1  disintegrin and metalloproteinase domain-containing protein 23 isoform X2

    Conserved Domains (4) summary
    smart00050
    Location:512 → 586
    DISIN; Homologues of snake disintegrins
    smart00608
    Location:588 → 727
    ACR; ADAM Cysteine-Rich Domain
    pfam01421
    Location:300 → 497
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:127 → 249
    Pep_M12B_propep; Reprolysin family propeptide

  3. XM_045164560.1 → XP_045020495.1  disintegrin and metalloproteinase domain-containing protein 23 isoform X3

    Related
    ENSBALP00030073430.1, ENSBALT00030110091.1
    Conserved Domains (4) summary
    smart00050
    Location:512 → 586
    DISIN; Homologues of snake disintegrins
    smart00608
    Location:588 → 727
    ACR; ADAM Cysteine-Rich Domain
    pfam01421
    Location:300 → 497
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:127 → 249
    Pep_M12B_propep; Reprolysin family propeptide

  4. XM_045164562.1 → XP_045020497.1  disintegrin and metalloproteinase domain-containing protein 23 isoform X4

    Related
    ENSBALP00030073439.1, ENSBALT00030110113.1
    Conserved Domains (4) summary
    smart00050
    Location:512 → 586
    DISIN; Homologues of snake disintegrins
    smart00608
    Location:588 → 727
    ACR; ADAM Cysteine-Rich Domain
    pfam01421
    Location:300 → 497
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:127 → 249
    Pep_M12B_propep; Reprolysin family propeptide

  5. XM_045164557.1 → XP_045020492.1  disintegrin and metalloproteinase domain-containing protein 23 isoform X1

    Related
    ENSBALP00030073405.1, ENSBALT00030110027.1
    Conserved Domains (4) summary
    smart00050
    Location:512 → 586
    DISIN; Homologues of snake disintegrins
    smart00608
    Location:588 → 727
    ACR; ADAM Cysteine-Rich Domain
    pfam01421
    Location:300 → 497
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:127 → 249
    Pep_M12B_propep; Reprolysin family propeptide

  6. XM_045164559.1 → XP_045020494.1  disintegrin and metalloproteinase domain-containing protein 23 isoform X1

    Conserved Domains (4) summary
    smart00050
    Location:512 → 586
    DISIN; Homologues of snake disintegrins
    smart00608
    Location:588 → 727
    ACR; ADAM Cysteine-Rich Domain
    pfam01421
    Location:300 → 497
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:127 → 249
    Pep_M12B_propep; Reprolysin family propeptide
Nucleotide Protein
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