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ANTXR1 ANTXR cell adhesion molecule 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102393445, updated on 10-Mar-2024

Summary

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Gene symbol
ANTXR1
Gene description
ANTXR cell adhesion molecule 1
See related
EnsemblRapid:ENSBALG00030009209
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
18
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 12 NC_059168.1 (66932121..67191044)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 12 NC_058354.1 (66679754..66939338)

Chromosome 12 - NC_059168.1Genomic Context describing neighboring genes Neighboring gene gastrokine 2 Neighboring gene gastrokine 1 Neighboring gene glutamine--fructose-6-phosphate transaminase 1 Neighboring gene NFU1 iron-sulfur cluster scaffold

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthrax toxin receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059168.1 Reference NDDB_SH_1 Primary Assembly

    Range
    66932121..67191044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006049074.4 → XP_006049136.1  anthrax toxin receptor 1

    Related
    ENSBALP00030017221.1, ENSBALT00030025828.1
    Conserved Domains (3) summary
    cd01474
    Location:39 → 223
    vWA_ATR; ATR (Anthrax Toxin Receptor): Anthrax toxin is a key virulence factor for Bacillus anthracis, the causative agent of anthrax. ATR is the cellular receptor for the anthrax protective antigen and facilitates entry of the toxin into cells. The VWA domain in ...
    pfam05586
    Location:396 → 488
    Ant_C; Anthrax receptor C-terminus region
    pfam05587
    Location:225 → 319
    Anth_Ig; Anthrax receptor extracellular domain
Nucleotide Protein
Heading Accession and Version

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