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CNN1 calponin 1 [ Papio anubis (olive baboon) ]

Gene ID: 101012955, updated on 8-Mar-2024

Summary

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Gene symbol
CNN1
Gene description
calponin 1
See related
Ensembl:ENSPANG00000017792
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See CNN1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 20 NC_044995.1 (40311013..40322013, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 19 NC_018170.2 (10487000..10498471)

Chromosome 20 - NC_044995.1Genomic Context describing neighboring genes Neighboring gene acid phosphatase 5, tartrate resistant Neighboring gene elongation factor 1 Neighboring gene 40S ribosomal protein S12-like Neighboring gene ECSIT signaling integrator Neighboring gene zinc finger protein 653

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calponin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044995.1 Reference Panubis1.0 Primary Assembly

    Range
    40311013..40322013 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003914937.4 → XP_003914986.1  calponin-1 isoform X1

    See identical proteins and their annotated locations for XP_003914986.1

    UniProtKB/TrEMBL
    A0A0A0MWZ3
    Related
    ENSPANP00000010746.2, ENSPANT00000010487.3
    Conserved Domains (2) summary
    pfam00402
    Location:212 → 236
    Calponin; Calponin family repeat
    cd21282
    Location:75 → 182
    CH_CNN1; calponin homology (CH) domain found in calponin-1 and similar proteins

  2. XM_009193553.3 → XP_009191817.1  calponin-1 isoform X2

    Conserved Domains (3) summary
    COG5199
    Location:37 → 196
    SCP1; Calponin [Cytoskeleton]
    pfam00307
    Location:37 → 135
    CH; Calponin homology (CH) domain
    pfam00402
    Location:172 → 195
    Calponin; Calponin family repeat
Nucleotide Protein
Heading Accession and Version

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