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ATG9A autophagy related 9A [ Papio anubis (olive baboon) ]

Gene ID: 101004251, updated on 8-Mar-2024

Summary

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Gene symbol
ATG9A
Gene description
autophagy related 9A
See related
Ensembl:ENSPANG00000017760
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 10 NC_044985.1 (103038883..103049222, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 12 NC_018163.2 (105208934..105219273, complement)

Chromosome 10 - NC_044985.1Genomic Context describing neighboring genes Neighboring gene zinc finger AN1-type containing 2B Neighboring gene uncharacterized LOC110740944 Neighboring gene ATP binding cassette subfamily B member 6 (LAN blood group) Neighboring gene ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 Neighboring gene galactosidase beta 1 like Neighboring gene serine/threonine kinase 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
autophagy-related protein 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044985.1 Reference Panubis1.0 Primary Assembly

    Range
    103038883..103049222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003907979.5 → XP_003908028.1  autophagy-related protein 9A

    See identical proteins and their annotated locations for XP_003908028.1

    UniProtKB/TrEMBL
    A0A096NPP6
    Conserved Domains (2) summary
    pfam04109
    Location:179 → 528
    APG9; Autophagy protein Apg9
    pfam12004
    Location:609 → 770
    DUF3498; Domain of unknown function (DUF3498)

  2. XM_003907978.4 → XP_003908027.1  autophagy-related protein 9A

    See identical proteins and their annotated locations for XP_003908027.1

    UniProtKB/TrEMBL
    A0A096NPP6
    Related
    ENSPANP00000014977.2, ENSPANT00000019718.3
    Conserved Domains (2) summary
    pfam04109
    Location:179 → 528
    APG9; Autophagy protein Apg9
    pfam12004
    Location:609 → 770
    DUF3498; Domain of unknown function (DUF3498)

  3. XM_009183129.3 → XP_009181393.1  autophagy-related protein 9A

    See identical proteins and their annotated locations for XP_009181393.1

    UniProtKB/TrEMBL
    A0A096NPP6
    Conserved Domains (2) summary
    pfam04109
    Location:179 → 528
    APG9; Autophagy protein Apg9
    pfam12004
    Location:609 → 770
    DUF3498; Domain of unknown function (DUF3498)

  4. XM_021924024.2 → XP_021779716.1  autophagy-related protein 9A

    UniProtKB/TrEMBL
    A0A096NPP6
    Conserved Domains (2) summary
    pfam04109
    Location:179 → 528
    APG9; Autophagy protein Apg9
    pfam12004
    Location:609 → 770
    DUF3498; Domain of unknown function (DUF3498)

  5. XM_021924023.2 → XP_021779715.1  autophagy-related protein 9A

    UniProtKB/TrEMBL
    A0A096NPP6
    Conserved Domains (2) summary
    pfam04109
    Location:179 → 528
    APG9; Autophagy protein Apg9
    pfam12004
    Location:609 → 770
    DUF3498; Domain of unknown function (DUF3498)

  6. XM_009183131.3 → XP_009181395.1  autophagy-related protein 9A

    See identical proteins and their annotated locations for XP_009181395.1

    UniProtKB/TrEMBL
    A0A096NPP6
    Conserved Domains (2) summary
    pfam04109
    Location:179 → 528
    APG9; Autophagy protein Apg9
    pfam12004
    Location:609 → 770
    DUF3498; Domain of unknown function (DUF3498)
Nucleotide Protein
Heading Accession and Version

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