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Arl13b ADP ribosylation factor like GTPase 13B [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768683, updated on 8-Mar-2024

Summary

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Gene symbol
Arl13b
Gene description
ADP ribosylation factor like GTPase 13B
Locus tag
I79_002837
See related
Ensembl:ENSCGRG00015005710
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613645.1 (1932350..1992007)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (30338164..30397645)

NW_003613645.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118238321 Neighboring gene protein S Neighboring gene 60S ribosomal protein L32-like Neighboring gene syntaxin 19 Neighboring gene NOP2/Sun RNA methyltransferase 3 Neighboring gene nucleophosmin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in non-motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor localization to non-motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in non-motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 13B
Names
ADP-ribosylation factor-like 13B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613645.1 Reference CriGri_1.0 Primary Assembly

    Range
    1932350..1992007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007609722.4 → XP_007607912.1  ADP-ribosylation factor-like protein 13B isoform X2

    UniProtKB/TrEMBL
    A0A9J7JP81, G3GYG1
    Conserved Domains (2) summary
    cd04161
    Location:23 → 189
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13
    pfam00071
    Location:24 → 172
    Ras; Ras family

  2. XM_003497270.5 → XP_003497318.1  ADP-ribosylation factor-like protein 13B isoform X1

    UniProtKB/TrEMBL
    A0A8C2MVT0, G3GYG1
    Conserved Domains (2) summary
    cd04161
    Location:23 → 189
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13
    pfam00071
    Location:24 → 172
    Ras; Ras family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    30338164..30397645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027412437.2 → XP_027268238.1  ADP-ribosylation factor-like protein 13B isoform X2

    UniProtKB/TrEMBL
    A0A9J7JP81, G3GYG1
    Related
    ENSCGRP00015048821.1, ENSCGRT00015049411.1

  2. XM_027412436.2 → XP_027268237.1  ADP-ribosylation factor-like protein 13B isoform X1

    UniProtKB/TrEMBL
    A0A8C2MVT0, G3GYG1
    Related
    ENSCGRP00015007343.1, ENSCGRT00015009019.2
Nucleotide Protein Strain
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