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ATG9A autophagy related 9A [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100583196, updated on 8-Mar-2024

Summary

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Gene symbol
ATG9A
Gene description
autophagy related 9A
See related
EnsemblRapid:ENSNLEG00000009166
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22a
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 22a NC_044402.1 (119896889..119907284, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 22a NC_019837.1 (110149881..110160430, complement)

Chromosome 22a - NC_044402.1Genomic Context describing neighboring genes Neighboring gene zinc finger AN1-type containing 2B Neighboring gene ATP binding cassette subfamily B member 6 (LAN blood group) Neighboring gene ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 Neighboring gene galactosidase beta 1 like Neighboring gene serine/threonine kinase 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
autophagy-related protein 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044402.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    119896889..119907284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030802404.1 → XP_030658264.1  autophagy-related protein 9A isoform X1

    UniProtKB/TrEMBL
    G1RDA2
    Conserved Domains (2) summary
    pfam04109
    Location:37 → 525
    APG9; Autophagy protein Apg9
    cl41730
    Location:727 → 833
    KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

  2. XM_030802407.1 → XP_030658267.1  autophagy-related protein 9A isoform X2

    UniProtKB/TrEMBL
    G1RDA2
    Conserved Domains (2) summary
    pfam04109
    Location:1 → 464
    APG9; Autophagy protein Apg9
    cl41730
    Location:666 → 772
    KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

  3. XM_030802401.1 → XP_030658261.1  autophagy-related protein 9A isoform X1

    UniProtKB/TrEMBL
    G1RDA2
    Related
    ENSNLEP00000011201.3, ENSNLET00000011754.3
    Conserved Domains (2) summary
    pfam04109
    Location:37 → 525
    APG9; Autophagy protein Apg9
    cl41730
    Location:727 → 833
    KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

  4. XM_030802406.1 → XP_030658266.1  autophagy-related protein 9A isoform X1

    UniProtKB/TrEMBL
    G1RDA2
    Conserved Domains (2) summary
    pfam04109
    Location:37 → 525
    APG9; Autophagy protein Apg9
    cl41730
    Location:727 → 833
    KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

  5. XM_030802402.1 → XP_030658262.1  autophagy-related protein 9A isoform X1

    UniProtKB/TrEMBL
    G1RDA2
    Conserved Domains (2) summary
    pfam04109
    Location:37 → 525
    APG9; Autophagy protein Apg9
    cl41730
    Location:727 → 833
    KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

  6. XM_030802408.1 → XP_030658268.1  autophagy-related protein 9A isoform X2

    UniProtKB/TrEMBL
    G1RDA2
    Conserved Domains (2) summary
    pfam04109
    Location:1 → 464
    APG9; Autophagy protein Apg9
    cl41730
    Location:666 → 772
    KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

  7. XM_030802403.1 → XP_030658263.1  autophagy-related protein 9A isoform X1

    UniProtKB/TrEMBL
    G1RDA2
    Conserved Domains (2) summary
    pfam04109
    Location:37 → 525
    APG9; Autophagy protein Apg9
    cl41730
    Location:727 → 833
    KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins
Nucleotide Protein
Heading Accession and Version

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