U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ARHGAP5 Rho GTPase activating protein 5 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100471100, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ARHGAP5
Gene description
Rho GTPase activating protein 5
Locus tag
PANDA_007030
See related
Ensembl:ENSAMEG00000015709
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 20 NC_048237.1 (10062546..10169212)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217554.1 (784814..890734, complement)

Chromosome 20 - NC_048237.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117797242 Neighboring gene G protein-coupled receptor 33 Neighboring gene NUBP iron-sulfur cluster assembly factor, mitochondrial Neighboring gene cell division cycle-associated protein 3-like Neighboring gene uncharacterized LOC117797261 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rho GTPase-activating protein 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048237.1 Reference ASM200744v2 Primary Assembly

    Range
    10062546..10169212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002918511.4 → XP_002918557.1  rho GTPase-activating protein 5 isoform X1

    See identical proteins and their annotated locations for XP_002918557.1

    UniProtKB/TrEMBL
    D2H9M0
    Related
    ENSAMEP00000016572.1, ENSAMET00000017256.2
    Conserved Domains (5) summary
    smart00441
    Location:429 → 481
    FF; Contains two conserved F residues
    cd04373
    Location:1261 → 1445
    RhoGAP_p190; RhoGAP_p190: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and ...
    pfam00071
    Location:28 → 244
    Ras; Ras family
    pfam16512
    Location:260 → 338
    RhoGAP-FF1; p190-A and -B Rho GAPs FF domain
    cl21455
    Location:31 → 246
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_034648362.1 → XP_034504253.1  rho GTPase-activating protein 5 isoform X1

    UniProtKB/TrEMBL
    D2H9M0

  3. XM_034648363.1 → XP_034504254.1  rho GTPase-activating protein 5 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.