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APOA4 apolipoprotein A4 [ Papio anubis (olive baboon) ]

Gene ID: 100126709, updated on 8-Mar-2024

Summary

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Gene symbol
APOA4
Gene description
apolipoprotein A4
See related
Ensembl:ENSPANG00000003384
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Also known as
ApoA-IV
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 12 NC_044987.1 (17734279..17744029)
103 previous assembly Panu_3.0 (GCF_000264685.3) 14 NC_018165.2 (106788588..106798351, complement)

Chromosome 12 - NC_044987.1Genomic Context describing neighboring genes Neighboring gene SIK family kinase 3 Neighboring gene apolipoprotein A1 Neighboring gene apolipoprotein C3 Neighboring gene apolipoprotein A5 Neighboring gene ZPR1 zinc finger

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Baboon apolipoprotein A-IV. Identification of Lys76-->Glu that distinguishes two common isoforms and detection of length polymorphisms at the carboxyl terminus. Hixson JE, et al. J Biol Chem, 1993 Jul 25. PMID 8101842

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine-sterol O-acyltransferase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in high-density lipoprotein particle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipoprotein metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reverse cholesterol transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very-low-density lipoprotein particle remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of chylomicron IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of high-density lipoprotein particle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apolipoprotein A-IV

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044987.1 Reference Panubis1.0 Primary Assembly

    Range
    17734279..17744029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009187351.3 → XP_009185615.1  apolipoprotein A-IV

    See identical proteins and their annotated locations for XP_009185615.1

    UniProtKB/Swiss-Prot
    Q28758
    Related
    ENSPANP00000011089.3, ENSPANT00000007603.3
    Conserved Domains (3) summary
    pfam01442
    Location:66 → 235
    Apolipoprotein; Apolipoprotein A1/A4/E domain
    pfam06386
    Location:170 → 275
    GvpL_GvpF; Gas vesicle synthesis protein GvpL/GvpF
    cl02073
    Location:76 → 219
    DUF3422; Protein of unknown function (DUF3422)

  2. XM_003910740.5 → XP_003910789.1  apolipoprotein A-IV

    See identical proteins and their annotated locations for XP_003910789.1

    UniProtKB/Swiss-Prot
    Q28758
    Conserved Domains (3) summary
    pfam01442
    Location:66 → 235
    Apolipoprotein; Apolipoprotein A1/A4/E domain
    pfam06386
    Location:170 → 275
    GvpL_GvpF; Gas vesicle synthesis protein GvpL/GvpF
    cl02073
    Location:76 → 219
    DUF3422; Protein of unknown function (DUF3422)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q28758.1 GenPept UniProtKB/Swiss-Prot:Q28758

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