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ADAMTSL4 ADAMTS like 4 [ Equus caballus (horse) ]

Gene ID: 100059096, updated on 8-Mar-2024

Summary

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Official Symbol
ADAMTSL4provided by VGNC
Official Full Name
ADAMTS like 4provided by VGNC
Primary source
VGNC:VGNC:15077
See related
Ensembl:ENSECAG00000019154
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ADAMTSL4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (43203360..43214180, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 5 NC_009148.2 (46527264..46535969, complement)

Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111773530 Neighboring gene endosulfine alpha Neighboring gene MCL1 apoptosis regulator, BCL2 family member Neighboring gene extracellular matrix protein 1 Neighboring gene threonyl-tRNA synthetase 2, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADAMTS-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009148.3 Reference EquCab3.0 Primary Assembly

    Range
    43203360..43214180 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023641242.1 → XP_023497010.1  ADAMTS-like protein 4 isoform X2

    UniProtKB/TrEMBL
    F7A7L3
    Conserved Domains (5) summary
    smart00209
    Location:73 → 103
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:506 → 620
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1048 → 1077
    PLAC; PLAC (protease and lacunin) domain
    cl26386
    Location:122 → 286
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl28271
    Location:208 → 353
    dnaA; chromosomal replication initiation protein; Provisional

  2. XM_023641241.1 → XP_023497009.1  ADAMTS-like protein 4 isoform X1

    UniProtKB/TrEMBL
    F7A7L3
    Related
    ENSECAP00000016761.3, ENSECAT00000020422.3
    Conserved Domains (5) summary
    smart00209
    Location:73 → 103
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:506 → 620
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1055 → 1084
    PLAC; PLAC (protease and lacunin) domain
    cl26386
    Location:122 → 286
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl28271
    Location:208 → 353
    dnaA; chromosomal replication initiation protein; Provisional

  3. XM_023641243.1 → XP_023497011.1  ADAMTS-like protein 4 isoform X3

    UniProtKB/TrEMBL
    F7A7L3
    Related
    ENSECAP00000080873.1, ENSECAT00000105079.1
    Conserved Domains (4) summary
    smart00209
    Location:73 → 103
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:506 → 620
    ADAM_spacer1; ADAM-TS Spacer 1
    cl26386
    Location:122 → 286
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl28271
    Location:208 → 353
    dnaA; chromosomal replication initiation protein; Provisional
Nucleotide Protein
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