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AASS aminoadipate-semialdehyde synthase [ Equus caballus (horse) ]

Gene ID: 100056260, updated on 8-Mar-2024

Summary

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Official Symbol
AASSprovided by VGNC
Official Full Name
aminoadipate-semialdehyde synthaseprovided by VGNC
Primary source
VGNC:VGNC:14895
See related
Ensembl:ENSECAG00000021479
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
25
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 4 NC_009147.3 (78454012..78507437, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 4 NC_009147.2 (78213368..78268559, complement)

Chromosome 4 - NC_009147.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111773233 Neighboring gene protein tyrosine phosphatase receptor type Z1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111773234 Neighboring gene FEZ family zinc finger 1 Neighboring gene calcium dependent secretion activator 2 Neighboring gene ring finger protein 133

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables saccharopine dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lysine biosynthetic process via aminoadipic acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-aminoadipic semialdehyde synthase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009147.3 Reference EquCab3.0 Primary Assembly

    Range
    78454012..78507437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001502175.4 → XP_001502225.1  alpha-aminoadipic semialdehyde synthase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_001502225.1

    UniProtKB/TrEMBL
    A0A3Q2HTT4, A0A3Q2LM70
    Related
    ENSECAP00000036671.2, ENSECAT00000063655.2
    Conserved Domains (4) summary
    PLN02819
    Location:25 → 914
    PLN02819; lysine-ketoglutarate reductase/saccharopine dehydrogenase
    cd12189
    Location:25 → 466
    LKR_SDH_like; bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase enzyme
    pfam03435
    Location:482 → 597
    Sacchrp_dh_NADP; Saccharopine dehydrogenase NADP binding domain
    pfam16653
    Location:601 → 913
    Sacchrp_dh_C; Saccharopine dehydrogenase C-terminal domain

  2. XM_023639564.1 → XP_023495332.1  alpha-aminoadipic semialdehyde synthase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3Q2LM70
    Conserved Domains (3) summary
    cd12189
    Location:25 → 466
    LKR_SDH_like; bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase enzyme
    pfam03435
    Location:482 → 597
    Sacchrp_dh_NADP; Saccharopine dehydrogenase NADP binding domain
    pfam16653
    Location:601 → 727
    Sacchrp_dh_C; Saccharopine dehydrogenase C-terminal domain

RNA

  1. XR_002807565.1 RNA Sequence

    Related
    ENSECAT00000034807.3
Nucleotide Protein
Heading Accession and Version

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