1GUX,1D3U,1D3U,1JOW,1JOW,1KXU,1KXU,1QMZ,1VOL,1VOL,1W98,2IVX,2IVX,2JGZ,2PK9,2W96,2W96,4CXA,4CXA,4ROC,4Y72,4YOZ,5FGK,5ICP,5IF1,5L2W,6CNB,6EU0


Conserved Protein Domain Family
CYCLIN_SF

?
cd00043: CYCLIN_SF 
Click on image for an interactive view with Cn3D
Cyclin box fold superfamily
The cyclin box is a protein binding domain that functions in cell-cycle and transcriptional control. It is about 100 amino acids in length, composed of five helices, and is present in cyclins, transcription initiation factor IIB (TFIIB), and retinoblastoma tumour suppressor protein (Rb). Cyclins consist of 8 classes of cell cycle regulators that function as regulatory subunits of cyclin-dependent kinases (CDKs), which are serine/threonine kinases. The catalytic activities of CDKs are modulated not only by their interactions with cyclins but also by CDK inhibitors (CKIs). CDKs, cyclins and CKIs play key roles in transcription, epigenetic regulation, metabolism, stem cell self-renewal, neuronal functions, and spermatogenesis. TFIIB is a transcription factor that binds the TATA box. Members in this superfamily contain one or two copies of the cyclin box.
Statistics
?
PSSM-Id: 410207
Aligned: 665 rows
Threshold Bit Score: 28.1453
Created: 1-Nov-2000
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1GUX_B        22 LAYLRLNTLCERlls--ehPELEHIIWTLFQHTLqneyel----mrdrhlDQIMMCSMYGICKvknidlKFKIIVTAYkd 95  human
EMA25405      34 TALEYIEELSAQln---msDQICIRTAEIYGQAAieqtt------dgrstEAIVIAAVIIASRefqkpyAIGRIASVTdt 104 Haloarcula amyl...
AIF07160      30 LAKKLIKAYTEKvs---sqKIISSRTEELFKNSRkllk--------gkdtASFVAACLHIACReqeipsSPIIIAELAnv 98  uncultured mari...
AIF10971      85 KIKNLVEKYAAKik---hnETIVNKTLELINKSRkihk--------gknaDTFVVACLYIVYRrqgipsTPASITTKTni 153 uncultured mari...
CDW73110     184 KGLRAIKDYAQMln---mkEGTINMACDIYKEIEdkeil------rgksvNGKVAGAIYYASRknnqprSLKKILATMqv 254 Stylonychia lemnae
WP_049972537  77 EMIGRTESFVRQlg---gnTTDCIWSVEILASAWehryf------hgrkvEVGIAAAIYVTFRehekprPFGVIAEVCgt 147 Haladaptatus ci...
KRX09735      74 NIQDMIRDLKLNsdypeylDRIGATPLRIIKFAYkgmfld-----ngtniKHYSAAALYIALRfhkapfLLMDFSDKLav 148 Pseudocohnilemb...
WP_092664627  60 QAIGLLEDLTPIfq---ltSPQRIATAEIVRDAVqtrvt------dgrhnGSIVAAALILAKRkgntplSINRVATAAsl 130 Halorientalis p...
OYT27249     192 RILSYTKYALSKl------NFTSDERLRVYKKVIltlrqiskstlqgknpKVLAAALIYRASRelglklSLTTISQTLgi 265 Thermoprotei ar...
GAY25517      12 RMESLIKELAASie---apRDITDKALDIAIRCIekglt------rgrsyRCVALAALYAASRilgrpfPLKRISTIAgv 82  Desulfurococcac...
1GUX_B        96 lphavqetfkrvlikeeeydSIIVFYNS 123 human
EMA25405     105 d-----------------vrDIRQALSR 115 Haloarcula amylolytica JCM 13557
AIF07160      99 k-----------------rdKLIDIFNQ 109 uncultured marine thaumarchaeote KM3_200_B02
AIF10971     154 k-----------------ikKFIDYYKK 164 uncultured marine thaumarchaeote KM3_47_F06
CDW73110     255 n-----------------fkELNSCTKK 265 Stylonychia lemnae
WP_049972537 148 s-----------------peELRVGYRS 158 Haladaptatus cibarius
KRX09735     149 n-----------------lfKLAKCYRK 159 Pseudocohnilembus persalinus
WP_092664627 131 s-----------------qtDLRSAVGV 141 Halorientalis persicus
OYT27249     266 s-----------------ivTLREYVKK 276 Thermoprotei archaeon ex4572_64
GAY25517      83 p-----------------lkDLRSCYNS 93  Desulfurococcaceae archaeon AG1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap