4DLO,4DLQ


Conserved Protein Domain Family
GAIN

?
pfam16489: GAIN (this model, PSSM-Id:293098 is obsolete and has been replaced by 465137)
Click on image for an interactive view with Cn3D
GPCR-Autoproteolysis INducing (GAIN) domain
The GAIN a domain of alpha-helices and beta-strands that is found in cell-adhesion GPCRs and precedes the GPS motif where the autoproteolysis occurs, family, pfam01825. The full GAIN domain, comprises the GPS and the GAIN, in cell-adhesion GPCRs, and is the functional unit for autoproteolysis. The GPS motif at the end of the GAIN domain is an ancient domain that exists in primitive ancestor organizms, and the full GAIN + GPS is conserved in all cell-adhesion GPCRs and all PKD1-related proteins.
Statistics
?
PSSM-Id: 293098
Aligned: 106 rows
Threshold Bit Score: 107.705
Created: 24-Jul-2015
Updated: 5-Aug-2015
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4DLO_A        101 MSQVTKTLLDLTqRKNFYAGDLLMSVEILRNVTDTFKRasyiPAS-------------------------DGVQNFFQIV 155  human
XP_010737317  542 AANIAGELVNLT-RGRIYAGDVSMSVRLIEQLLDILDS----QLQalrpankesaarnynklqkrertcrAYVQAVVQIV 616  large yellow ...
XP_007236365  541 AAHIAAVLVNHT-RGHVYAGDVTSSVRLMEQLLDILDS----QLQalrpatkdsatrnynklqkrertcrAFIQALVQTV 615  Mexican tetra
XP_008289398  515 AANIASELVNHT-RGRIQAGDVSSSVRLIEQLLDILDA----QLQalrpgnkesagrnynkfqkrertcrAYIQAVVQTV 589  bicolor damse...
XP_006792129  530 AANLANELAKHT-KGPIFAGDVSSSVRLMEQLVDILDA----QLQelrpsekdsagrsfnklqkrertcrAYMKAIVDTV 604  Neolamprologu...
XP_011614410  541 AATLANELARHT-QDPVFAGDVSSSVRLMEQLVDILDA----QLQelrpsekd-------------sagrsfnKAIVDTV 602  torafugu
BAC98025       27 AASLANELAKHT-KGHVFAGDVSSSVRLMEQLVDILDA----QLQelkpsekd-------------sagrsynKAIVDTV 88   house mouse
XP_011473836  619 AAIVARELAEQT-KGPLRPGDVPSTVRAMAQLVELLDV----QLRnltpggkdsaarsltklqkrerscrFFTQAMVETV 693  Japanese medaka
XP_008302262  468 AAVIARELAEQT-KSNLQAGDITYTVKAMVQLVDLLDV----QLRnltpggkdsaarslnklqkrerscrFYVQAMVETV 542  bicolor damse...
KFV07581       71 AANIARELAEHT-KNHLYAGDITYSVSAMVQLVNLLDV----QLRnltpggkdsaarslnklqkrerscrayvqAMVETV 145  yellow-throat...
4DLO_A        156 SNLLDEENKEKWED--AQQIypgsieLMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKLPAASVltdinfpmkgrkg 233  human
XP_010737317  617 DNLLGPEALVSWADmsSVDQshsaslLLDAVEKGAFLLANNLYE-GRFSDRAPNVDLEVYVLNTEADiqdltf------- 688  large yellow ...
XP_007236365  616 DNLLRWEALDSWQDmnATEQshtatmVLDVMEKASFLLANNLYE-GRFSDRAPNVDLEVYVLNTEMDirdlff------- 687  Mexican tetra
XP_008289398  590 DNLLRPEALESWQDmnSTEQahtatmLLDVLEKGAFLLANNMYG-NRFSDRAPSIDLEVHVVNTEMDlqdlsf------- 661  bicolor damse...
XP_006792129  605 DNLLRPEALKSWQDmnSTEQthaatmLLDTLEEGAFVLADNLMEPAIVKVPADNIILEVYVLSTDGQvqdfkf------- 677  Neolamprologu...
XP_011614410  603 DNLLRPEALKSWKDmnSTEQshsatmLLDTLEEGAFVLAENLIEPAIVKVPAENIMLDVYVLSTDGQvhdfrf------- 675  torafugu
BAC98025       89 DNLLRAEALESWKHmnSSEQahtatmLLDTLEEGAFVLADNLLEPTRVSMPTENIVLEVAVLSTEGQvqdfkfp------ 162  house mouse
XP_011473836  694 NNLLHPRAQTAWRElpTSEQlhsatmLLDTVETGAFMLADNLLKTDTVQETTEYIQLEVARLSTDGNladltf------- 766  Japanese medaka
XP_008302262  543 NNLLQPQAQAAWRElsTGEQlraatmLLDTVEQGAFVLADNLLKTDIVQENTDNIQLEVARMSTDGNlpdlkf------- 615  bicolor damse...
KFV07581      146 NNLLQPQALNAWRDlnASEQqraatkLLDTVEDSAFVLADNLLKTDIVRENTDNIQLEVARLSTDGNledlkf------- 218  yellow-throat...
4DLO_A        234 mvdwarnsEDRVVIPKsiftpvSSKELDESSVFVlgavlYKNLDLILPtlr-----------------nyTVINSKIIVV 296  human
XP_010737317  689 --phsydsDSILQISAlal-qqYSNNGQVKLVLTl----YKNLGSFLTtqnstlrlglglaqgsearrrsLVVNSHVISA 761  large yellow ...
XP_007236365  688 --phsydsDSTIQLPSati-kqYSRNGQVKVVFAl----YKNLGSFLStqnatvkme----aevkpggrkLAVNSHVISA 756  Mexican tetra
XP_008289398  662 --pqnyasDSTIQLSAsti-kqYSRNGQVKVVFIl----YKNLGSFLStenatvkmev---dglnqdkkrLAVNSHVIAA 731  bicolor damse...
XP_006792129  678 --pqigksGISIQLSAntv-klNSRNGVAKLVFMl----YKNLSQFLStenatikmd----ndayarnvsVAVNSDIIAA 746  Neolamprologu...
XP_011614410  676 --pqtnkgGATLQLSSntv-kvNSKNGVAKLVFVl----YKHLGQFLStenatlrgi----gdlnkhnlsLTVNSHILSA 744  torafugu
BAC98025      163 --lglkglGSSIQLSAntv-kqNSRNGLAKLVFIi----YRSLGQFLStenatiklg----adlmgrnstIAVNSPVISV 231  house mouse
XP_011473836  767 --pqseqhGNSIQLSAstl-kqHGKNGEIRMAFVl----YRNLGSYLPtenasvrlg----geavypnysVIVNSPVITA 835  Japanese medaka
XP_008302262  616 --pqtggqGNSIHLSAntl-kqHGRNGEIRIAFVl----YKHIGVYLStenasmklg----seamatnysVIVNSPVITA 684  bicolor damse...
KFV07581      219 --pqnmghGSAIQLSAntl-kqNGRNGEIRVAFVl----YNNLGTYLStenasmklg----teamstnhsVIVNSPVITA 287  yellow-throat...
4DLO_A        297 TI 298  human
XP_010737317  762 SV 763  large yellow croaker
XP_007236365  757 SM 758  Mexican tetra
XP_008289398  732 SI 733  bicolor damselfish
XP_006792129  747 SI 748  Neolamprologus brichardi
XP_011614410  745 SI 746  torafugu
BAC98025      232 SI 233  house mouse
XP_011473836  836 SI 837  Japanese medaka
XP_008302262  685 AI 686  bicolor damselfish
KFV07581      288 AI 289  yellow-throated sandgrouse
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap