3LPG,4JKM,3T0B,3OB8,3DEC


Conserved Protein Domain Family
Glyco_hydro_2_N

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pfam02837: Glyco_hydro_2_N (this model, PSSM-Id:280926 is obsolete and has been replaced by 397120)
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Glycosyl hydrolases family 2, sugar binding domain
This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold.
Statistics
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PSSM-Id: 280926
Aligned: 48 rows
Threshold Bit Score: 138.648
Created: 11-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3LPG_B         12 REIKKLDG-------LWAFSLDRENCGidqrwWESa-----------lQES---RAIAVPGSFNDQ-------------- 56   Escherichia c...
Q8A925         25 TERQYLSGhgcddmvEWDFFCTDGRNSgk------------------------wTKIGVPSCWELQgfgt---------- 70   Bacteroides t...
Q8DQP4        149 NRKVDFNQ-------NWYFKLNANS-------KEAik---------pdADVstwKKLDLPYDWSIFndf----------- 194  Streptococcus...
Q825H8         38 RHTVALRD-------GWRFALVNPg-------GITdptgayadaadpgHDDsgwREVAVPHDWSIEqtp----------- 92   Streptomyces ...
Q8PB68        151 RD---FEFgt----fQRTFAKAGKDt------ATAaq---------laFDDsnwQQVDLPHDWAVTlpfrpepisasmte 208  Xanthomonas c...
Q8A4C3         25 RNKYNFNS-------DWLLYVGDVp-------EAKqp----------rFSDsewKKVTLPHAFNEDea------------ 68   Bacteroides t...
Q8A040         25 RKKYNFNS-------EWRLQIGDFp-------EAKqs----------qFDDsrwKAVTLPHAFNEDea------------ 68   Bacteroides t...
Q89YP7         45 RTVYNMNP-------AWRFYKGNIe-------GAEqp----------rFNDkdwNIVSLPDGIEYLp------------- 87   Bacteroides t...
Q8A934         43 RQVYNFNP-------GWRFFKGDIr-------GAEav----------nFDDrswEVVSTPHTVELMp------------- 85   Bacteroides t...
WP_047285315   62 NRTSDFDA-------NWKFMLSDSVQ------AQDp-----------aFDDsawQQVDLPHDYSITqky----------- 106  Bifidobacteri...
3LPG_B         57 -------F----ADADIRNYAGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVXE-HQGGYTPFEADVTPYV 124  Escherichia c...
Q8A925         71 ---yqygItfygKAFPEGIADEKGMYKYEFEVPEKFRGQQVNLVFEASMTDTEVKVNGRKVGSkHQGAFYRFSYNVTDFL 147  Bacteroides t...
Q8DQP4        195 ----dheSp--aQNEGGQLNGGEAWYRKTFKLDEKDLKKNVRLTFDGVYMDSQVYVNGQLVGH-YPNGYNQFSYDITKYL 267  Streptococcus...
Q825H8         93 ----ttqYg--tTSGTGFLPGGLGWYRTAFTLPSALAGKRISVEFDGVYMDSYVYCNGTEVGR-HPYGYTGFAFDLTDLL 165  Streptomyces ...
Q8PB68        209 edpaaahGy--kALGTSFPENSVGWYRRMLQIPASDLGKRICLVFDGVFRDCVVFCNGHIVGR-NASGYCGFEVDLSEVL 285  Xanthomonas c...
Q8A4C3         69 ------fR-----LSIDELTDTIMWYRKHFRLPANSKNKKVFVEFEGVRQGADFYINGQNVGL-HENGVMAVGFDLTPYI 136  Bacteroides t...
Q8A040         69 ------fK-----VSIEQLTDTVVWYRKHFRIPASGKKQKVFIEFEGVRQAGDFYLNGQYLGK-HENGVMAAGFDLTPYI 136  Bacteroides t...
Q89YP7         88 -----------tEASGCINYQGEIWYRKHFTPKESWKGKQQFLHFEAIMGKSKIWVNGKLLKE-HFGGFLPVIVDVTSSL 155  Bacteroides t...
Q8A934         86 -----------aEGSGCRNYQGPAWYRKHFVVPTATKGQRVLLHFEAAMGKQVLYLNGKRVQE-HLGGYLPFTLDLTANG 153  Bacteroides t...
WP_047285315  107 ----sqsN----EAESAYLPGGTGWYRKSFTIDRDLAGKRIAINFDGVYMNATVWFNGVKLGT-HPYGYSPFSFDLTGNA 177  Bifidobacteri...
3LPG_B        125 IAGKs--VRITVCVN------NELNWQTIPpgxvitdengkkkqsyFHDFFNYAGIHRSVXLYTTP 182  Escherichia coli K-12
Q8A925        148 KYGKk--NLLEVTVS------KESENASVNla------------erRADYWNFGGIFRPVFLEVKP 193  Bacteroides thetaiotaomicron
Q8DQP4        268 YKDGr-eNVIAVHAVn-----KQPSSRW----------------------YSGSGIYRDVTLQVTD 305  Streptococcus pneumoniae R6
Q825H8        166 HTDGtteNVIAVKVQn-----RLPSSRW----------------------YSGSGIYREARLVVTE 204  Streptomyces avermitilis
Q8PB68        286 DYGKp--NLIVVRVD------ATLGEGW---------------------FYEGAGIYRHLWLQKTD 322  Xanthomonas campestris pv. ...
Q8A4C3        137 KYGQe--NVIAVRIDndwnykERATGTKYQws-------------nKNFNANYGGIPKNVWLHVTD 187  Bacteroides thetaiotaomicron
Q8A040        137 KEGD---NVLAVRTDndwmyrEKSTNSKFQwn-------------dRNFNANYGGLPKNVFLYVTD 186  Bacteroides thetaiotaomicron
Q89YP7        156 KYGEd--NVITVWAD------NSDDPSYPPgkp-----------qdALDFAYFGGIYRDCWMIVHN 202  Bacteroides thetaiotaomicron
Q8A934        154 VQAGd-sCLLAVYTD------NSNDKSYPPgkp-----------qyTLDFAYHGGIYRDVWMIAKS 201  Bacteroides thetaiotaomicron
WP_047285315  178 KFGGe--NTIVVKVE------NRLPSSR---------------------WYSGSGIYRDVTLTVTD 214  Bifidobacterium bifidum
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