Conserved Protein Domain Family
HSPA14-like_NBD

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cd10238: HSPA14-like_NBD (this model, PSSM-Id:212680 is obsolete and has been replaced by 466836)
Nucleotide-binding domain of human HSPA14 and similar proteins
Human HSPA14 (also known as 70-kDa heat shock protein 14, HSP70L1, HSP70-4; the gene encoding HSPA14 maps to 10p13), is ribosome-associated and belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). HSPA14 interacts with the J-protein MPP11 to form the mammalian ribosome-associated complex (mRAC). HSPA14 participates in a pathway along with Nijmegen breakage syndrome 1 (NBS1, also known as p85 or nibrin), heat shock transcription factor 4b (HSF4b), and HSPA4 (belonging to a different subfamily), that induces tumor migration, invasion, and transformation. HSPA14 is a potent T helper cell (Th1) polarizing adjuvant that contributes to antitumor immune responses.
Statistics
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PSSM-Id: 212680
Aligned: 8 rows
Threshold Bit Score: 577.413
Created: 16-Nov-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:nucleotide binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # ####                                                          #          
NP_057383      2 AAIGVHLGCTSACVAVYKDGR-AGVVANDAGDRVTPAVVAYSe--NEEIVGLAAKQSrIRNISNTVMKVKQILGrsssDP 78  human
NP_001038541   2 AAIGVHFGYTCACVAVFKDGR-ADVVANDAGDRVTPAVVAYRd--TEQIVGIAAKQGrIRNAANTVVKVKQILGrrydDP 78  zebrafish
NP_001091353   2 AAIGVHLGCTCACVAVFKDGR-ADVVANDAGDRVTPAVVGFLe--KEVIVGLAAKQSrVRNATNTIVKVKQILGrsygDP 78  African clawed ...
EEN45292       3 ASIGISFGATSACLATQKDGK-ADVVANEDGQRVTPAMVANTd--TEMVVGLAAKQGwIRNAANTITKVKQILGkkfaDP 79  Florida lancelet
ADD38429       5 SAFGIHIGNTNACLGVYKEGR-SDVVANDDGDRTTPATVSFLnggKEVVVGLAAKQGrFRNAKSTVMNNKRLLLds-fDL 82  salmon louse
EDV19738       2 TAFGLHFGGTNLTLAVCKDGQ-TEILANNDGHRSTPAVIACKg--AHYAVGINSALN-YRPGEDIIVENIRSIIglksED 77  Trichoplax adha...
EEB14158       3 ALFGVHVGNSSACIAIYKDVErSDIVANDAGDRITPTILQWTp--NGCTIGRTAQLElFRNGGNTIVRNKQLCNsnidDD 80  human body louse
EDO50037       5 LAIGVHLGATTSCVAVSADGN-TTIIANDAGDRVTPAMVAFSd--TEKNVGLPAKQGlIRNARNTILRAKRVLGksysDS 81  starlet sea ane...
Feature 1                                                                          #             
NP_057383     79 QAQkyiaESKCLVIEKNGKLRYEIDTGEETKFVNPEDVARLIFSKMKETAHSVLgs-daNDVVITVPFDFGEKQKNALGE 157 human
NP_001038541  79 DAQahkeESKCIVVNKSGLPRYEIDTGETTKYVSPEDVAKLIFHKMKETAQSALgs-dvKDAVITVPFEFDEMQKNALRQ 157 zebrafish
NP_001091353  79 IAQkhitESKCTVVEKGGKPKYEIDTGETQKLVSSEDVAKLIFSKMKETAQSALgs-dvNDVVITVPFDFGESQKKALGE 157 African clawed ...
EEN45292      80 AVEhavkTSSCKIVEKDSNPMYAVQHNGKTKHFSPTHITTVIFRKLMDIAQSKEms-ggKNAVVAVPLNFDEQQKDAVRR 158 Florida lancelet
ADD38429      83 SKHks-dPYAKVIHEAKTYKHNIHFEDNAVLKVTPDIIHQHLLKYIVDIAESRIee-dsKDVVITVPTSMSLEKRLLVSN 160 salmon louse
EDV19738      78 FKVqefvRKSKCKIESDEEDIIFKFKENLKDTFTLSRLVVLLLQKMKEITQTYTqe-epIRVVLAVPVYYKDVQILALKA 156 Trichoplax adha...
EEB14158      81 ELNylktQVPYKIQTHNSELKYEILYEGKQYHVSPKEVAISIFKKILSIAQSAVgvnteIKVVVSVPLYYSPKSIQVIKN 160 human body louse
EDO50037      82 VVQeeaaALQCKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKMLETAQSHCgs-ssNHVVLTVPVNFQEKEVSLLRE 160 starlet sea ane...
Feature 1                      #                        ###### #                                 
NP_057383    158 AARAAGFNVLRLIHEPSAALLAYGIGqdsptgksNILVFKLGGTSLSLSVMEVn-------------------------- 211 human
NP_001038541 158 AAESAGFNVLRLIHEPSAALLAYDIGqdsplgksHVLVYKLGGTSLSVTVLEVn-------------------------- 211 zebrafish
NP_001091353 158 AASAAGFNILRMIHEPSAALLAYGIGqesptgksNVLVYKLGGTSLSVTMIEVn-------------------------- 211 African clawed ...
EEN45292     159 AATEAGFHVLRTIPEPVAAAYAHNIGqespkdsrVALVYRVGGSSIDATVLAVsggmyrvcgcewgdvpsvwlvalvyrv 238 Florida lancelet
ADD38429     161 CAKKAGFNLLQMISEPAAACLAYNLGqsdnnqqdIVLVYRVGGIGTEATLVRSv-------------------------- 214 salmon louse
EDV19738     157 AAEEVGFNVLRFVKEPCAAALAYQIGqndiyengYYLIFRLGGKSTDVTILRVd-------------------------- 210 Trichoplax adha...
EEB14158     161 VANKAGFNVLQIVDEASVAALGCGLGldikeppyYCLVYRVGGYSIDATILLIq-------------------------- 214 human body louse
EDO50037     161 AAEEAGFHILRIINEPVAAALAYGMYn------tTVLVYRLGGASHDVTLLSVi-------------------------- 208 starlet sea ane...
Feature 1                                      ##                                     #  ##      
NP_057383    212 -------------SGIYRVLSTNTDDn-IGGAHFTETLAQYLASEFQRSFKhdv-rgNARAMMKLTNSAEVAKHSLSTlg 276 human
NP_001038541 212 -------------SGVYRVLATQTDHq-TGGESFTQELAQHLAAEFKKTFKqdv-sgNARAMMKLMNSADVAKHTLSTlg 276 zebrafish
NP_001091353 212 -------------SGIYRVLATSTYDg-IGGVCFTEALAQHLASEFQRTYKqdi-rgNARAMMKLMNSADVAKHALSTlg 276 African clawed ...
EEN45292     239 ggssidatvlavsGGMYRVLASVRRDh-LGGDQLNRIIVDYFVQEFKRKWKadv-teNTRAMAKLNTEAEKAKQILSTmp 316 Florida lancelet
ADD38429     215 -------------SGVYSILGSCIEDlgTGGTAISQLFVQYLANEFKRKYKldp-leSKRSVFKLENAAETVKHVLSTld 280 salmon louse
EDV19738     211 -------------GGLYEILAYKNEQn-FGGEDFSCTISECLIKEFEKKWNvqiprdSQRALNKFLKAAEQCKQILSLsp 276 Trichoplax adha...
EEB14158     215 -------------DGMFLVNGYSHKHn-LGGNSFTEKLSEFLANEFKRQYRtv--eiSERGKYKLNSAAEVAKQVLSIqn 278 human body louse
EDO50037     209 -------------NGMYKVLATEYDGa-LGGRNFDEVLLDLLANDFKRQWKidp-ltNKRSKTKLQTSAEQCKNILSTle 273 starlet sea ane...
Feature 1                                                                   ### ##               
NP_057383    277 SANCFLDSLYEGQDFDCNVSRARFELLCSPLFNKCIEAIRGLLDQNGFtaDDINKVVLCGGSSRIPKLQQLIKDLFPaVE 356 human
NP_001038541 277 SANCFVDSLYDGMDFECNVSRARFELICSSLFNKCIQPIKSLLEQVNLstSDVNKVVLSGGSARIPKLQQMIRDLFPdVE 356 zebrafish
NP_001091353 277 SSNCFVDSLYDGIDFDCSVSRARFELICSSLFNQCIDPIKKLLEQVGFkaTDVNQVVLCGGSARIPKLQQLIKDLFPeVE 356 African clawed ...
EEN45292     317 KASCHVESLHEGIDFQCDISRARFESIALSLLQQCLEPIEEAISQAEVkkQAINMVVLCGGSTKIPKLQKLVQDCVQqAE 396 Florida lancelet
ADD38429     281 TAPCHIESLYEGIDFNHSVTRARFNNELSKLMPTLLRPIHRVLELANVhiNKVNKVILCGGSCKIPAIQSNVSSLFPnAE 360 salmon louse
EDV19738     277 TATHFIESAYDGIDYQCSISRTKFEMLCSKLLEKCLNLIDNTLNDTSLtkTDIAKIILSGGSSRILKLQEIIKARFD-IP 355 Trichoplax adha...
EEB14158     279 VAQCSCESVGGGYDFNCSISRPRFESLISPLIPEIIEPIMDVLKKSGLnsENIKKVVTCGGCLKTPKLQDTVQKMFPsSE 358 human body louse
EDO50037     274 SANCSVDSLCEGIDFQGQVSRAKFESSCSSLFQRCLGSIEKVLSSANVpkDEVDKVILVGGATRTPKIQQLLKNYFVgKE 353 starlet sea ane...
Feature 1               #            
NP_057383    357 LLNSiPPDEVIPIGAAIEAG 376 human
NP_001038541 357 LLNSiPPDEVIPVGAAMQAG 376 zebrafish
NP_001091353 357 MLSSiPPDEVIPVGAAIQAG 376 African clawed frog
EEN45292     397 VLNSvSPDEVIAMGAAKQAA 416 Florida lancelet
ADD38429     361 ILNTiNPDEVIAKGAADQAA 380 salmon louse
EDV19738     356 VCVGiNPGEVIAIGAAAQGG 375 Trichoplax adhaerens
EEB14158     359 VINS-SPDEIIALGAAKQAG 377 human body louse
EDO50037     354 ICRRiSPDEVVAYGAAVQAS 373 starlet sea anemone

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