Conserved Protein Domain Family
BRO1_Rhophilin_1

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cd09248: BRO1_Rhophilin_1 
Protein-interacting Bro1-like domain of RhoA-binding protein Rhophilin-1
This subfamily contains the Bro1-like domain of the RhoA-binding protein, Rhophilin-1. It belongs to the BRO1_Alix_like superfamily which also includes the Bro1-like domains of mammalian Alix (apoptosis-linked gene-2 interacting protein X), His-Domain type N23 protein tyrosine phosphatase (HD-PTP, also known as PTPN23), RhoA-binding protein Rhophilin-2, Brox, Bro1 and Rim20 (also known as PalA) from Saccharomyces cerevisiae, Ustilago maydis Rim23 (also known as PalC), and related domains. Rhophilin-1 binds both GDP- and GTP-bound RhoA. Bro1-like domains are boomerang-shaped, and part of the domain is a tetratricopeptide repeat (TPR)-like structure. In addition to this Bro1-like domain, Rhophilin-1 contains an N-terminal Rho-binding domain and a C-terminal PDZ (PS.D.-95, Disc-large, ZO-1) domain. The Drosophila knockout of the Rhophilin-1 is embryonic lethal, suggesting an essential role in embryonic development. The isolated Bro1-like domain of Rhophilin-1 binds human immunodeficiency virus type 1 (HIV-1) nucleocapsid. Rhophilin-1 lacks the V-shaped (V) domain found in many members of the BRO1_Alix_ like superfamily.
Statistics
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PSSM-Id: 185771
Aligned: 5 rows
Threshold Bit Score: 714.733
Created: 24-Aug-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative ESCRT-III binding site
Evidence:
  • Comment:based on mutagenesis of Saccharomyces cerevisiae Bro1
  • Comment:a surface patch that comprises at least part of the Snf7 binding site of Bro1
  • Comment:binds the Snf7/CHMP4 components of ESCRT-III; CHMP4 proteins are mammalian homologs of yeast Snf7

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
Q8TCX5    109 MIPLGLKETKELdWSTPLKELISVHFGEDGASYEAEIRELEALRQAMRTPSRNESGLELLTAYYNQLCFLDARFLTPARs 188 human
Q61085    116 MIPLGLKETKELdWATPLKELISEHFGEDGTSFETEIQELEDLRQATRTPSRDEAGLDLLAAYYSQLCFLDARFFSPSRs 195 house mouse
XP_418410 123 MIPLGLKETKELdLLVPLKDFISEHYGEEGVMFEKEIKEFMELRQAMRTPSRNEAGLELLMEYYNQLYFLDSRFFPPSKs 202 chicken
AAH81320  112 MIPLGLKETKELdLTDALKDFIVHHYGDDGTLYDKEIREFMDLRQAMRTPSRSDAGIELLMEYYNQLYFLDNRFFPPNKp 191 western clawed frog
XP_539197  89 MRTGAENLYRGQhLPLPSQELISGHFGEDGASYGAEIRELEDLRQAIRTPSRSEAGLELLMAYYNQLCFLDTRFVAPAGs 168 dog
Feature 1                                        #  #            #  ##                        
Q8TCX5    189 LGLFFHWYDSLtGVPAQQRaLAFEKGSVLFNIGALHTQIGARQDRSCTEGARRAMEAFQRAAGAFSLLRENfSHAPSPDM 268 human
Q61085    196 PGLLFHWYDSLtGVPAQQRaLAFEKGSVLFNIGALHTQIGARQDCSCTEGTNHAAEAFQRAAGAFRLLRENfSHAPSPDM 275 house mouse
XP_418410 203 LGVFFHWYDSLtGVPSHQRaLAFEKGSVLFNIGALHTQIGARQDRASLPGLNQAIDAFQKAAGAFNYLKENfSNAPSLDM 282 chicken
AAH81320  192 LGVFFHWYDSLtGVPSCQRaLAFEKGSVLFNMGALYTQIGARQDRLSVEGVDTAIDAFQKAAGCFSYLKENfSNAPSLDM 271 western clawed frog
XP_539197 169 LGLLFHWYDSLtGVPAQQRaLAFEKGSVLFNIGALHTQIGARQDRSCPEGTRRAIKAFQRAAGAFSLLRENfSQAPSPDM 248 dog
Feature 1                        #  ##            #  ##                                       
Q8TCX5    269 SaASLCALEQLMMAQAQECVFEGLSppASMAPQDCLAQLRLAQEAAQVAAEYRLVHRTMaQPPVHDYVPvSWTALVHVKA 348 human
Q61085    276 SaASLSMLEQLMIAQAQECIFKGLLlpASATPDICPDQLQLAQEAAQVATEYGLVHRAMaQPPVRDYLPaSWTNLAHVKA 355 house mouse
XP_418410 283 StASLNMLVRLMVAQVQECVFEKVT--LLHTQKDFFSWLQLAQEAARVEDVYSLVHQTMtQAHVKDYVPfSWTTMVHVKS 360 chicken
AAH81320  272 StASLSMLVRLMVAQVQECIFEKFV--LQNPRSDFFTQLQAAQEAARVEEVYTLVYRTMtQPPVKDYIPfSWSTMVHVKA 349 western clawed frog
XP_539197 249 SpASLSMLEQLMTAQAQECIFEGLLlpPLATPQDGVAQLCLAQEAAQVAAEYRLVHQTMaQPPVRDYVPfPWTALEHVKA 328 dog
Feature 1                                                                                     
Q8TCX5    349 EYFRSLAHYHVAMALCdgsrecpphlpmvlprppragsqplcppaateGELPTHEQVFlQPPTssKPRGpv---lPQELE 425 human
Q61085    356 EHFCALAHYHAAMALCesh--------------------------pakGELARQEHVF-QPSTphEPLGpt---lPQHPE 405 house mouse
XP_418410 361 EHFKALSHYFAAIALCdcpv-------------------------asdAELPEHEKAFlQFHIt-MPEGpslrvlLQDPE 414 chicken
AAH81320  350 EHFRALSHYYAACALCdyst-------------------------aseAEVKTQEKAFsQFHVt-APEGpsvgfvLQDPE 403 western clawed frog
XP_539197 329 EHFCALATTTRPPQCAgsrpspsl-----------------tpaaaqaGFPALQQPLRgPPATs-QPWGsa---wPEEPE 387 dog
Feature 1                                                                                 # # 
Q8TCX5    426 ERRQLGKAHLKRAILGQEEALRLHALCRVLRevDLLRAVISQTLQRSLAKYAELDREDDFCEAAEAPDiqPKTHQKPEAR 505 human
Q61085    406 DRRKLAKAHLKRAILGQEEALRLHTLCRVLRkvDLLQVVVTQALRRSLAKYSQLEREDDFFEATEAPDiqPKTHQTPEGP 485 house mouse
XP_418410 415 ERRKLGKAHLKKAIMKHEEAMRIHGLCKILRkmDILQEVLSFAHKRSLSKYSEIDHEEDFFETGDAPDihPKTHQKPEIK 494 chicken
AAH81320  404 ERRKLGKAHLKKAIMKHEEAMRIHVLSKILRkmDILQEVLTLTHKQSLSKYSDIDHEEDFFETGEAPDiqPITCQRPEIK 483 western clawed frog
XP_539197 388 ERRKLGKAHLKRAILGQEEALRLHAVCRALRrvDLLQAVLARALRCSLAKYSELDREDDFLETSEAPDiqPKTQQKPEIR 467 dog
Feature 1     # #          
Q8TCX5    506 MPRLSQGKGPDIF 518 human
Q61085    486 LSVFSTKNRWQLV 498 house mouse
XP_418410 495 SPSFSQVKVTDLF 507 chicken
AAH81320  484 TPVFSKVKATDIF 496 western clawed frog
XP_539197 468 APSFSSVKVTDIF 480 dog

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