Conserved Protein Domain Family
BRO1_Rhophilin

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cd09244: BRO1_Rhophilin 
Protein-interacting Bro1-like domain of RhoA-binding protein Rhophilin and related domains
This family contains the Bro1-like domain of RhoA-binding proteins, Rhophilin-1 and -2, and related domains. It belongs to the BRO1_Alix_like superfamily which also includes the Bro1-like domains of mammalian Alix (apoptosis-linked gene-2 interacting protein X), His-Domain type N23 protein tyrosine phosphatase (HD-PTP, also known as PTPN23), Brox, Bro1 and Rim20 (also known as PalA) from Saccharomyces cerevisiae, Ustilago maydis Rim23 (also known as PalC), and related domains. Rhophilin-1 and -2 bind both GDP- and GTP-bound RhoA. Bro1-like domains are boomerang-shaped, and part of the domain is a tetratricopeptide repeat (TPR)-like structure. In addition to this Bro1-like domain, Rhophilin-1 and -2, contain an N-terminal Rho-binding domain and a C-terminal PDZ (PS.D.-95, Disc-large, ZO-1) domain. Their PDZ domains have limited homology. Rhophilin-1 and -2 have different activities. The Drosophila knockout of Rhophilin-1 is embryonic lethal, suggesting an essential role in embryonic development. Roles of Rhophilin-2 may include limiting stress fiber formation or increasing the turnover of F-actin in the absence of high levels of RhoA signaling activity. The isolated Bro1-like domain of Rhophilin-1 binds human immunodeficiency virus type 1 (HIV-1) nucleocapsid. This family lacks the V-shaped (V) domain found in many members of the BRO1_Alix _like superfamily.
Statistics
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PSSM-Id: 185767
Aligned: 11 rows
Threshold Bit Score: 541.933
Created: 24-Aug-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative ESCRT-III binding site
Evidence:
  • Comment:based on mutagenesis of Saccharomyces cerevisiae Bro1
  • Comment:a surface patch that comprises at least part of the Snf7 binding site of Bro1
  • Comment:binds the Snf7/CHMP4 components of ESCRT-III; CHMP4 proteins are mammalian homologs of yeast Snf7

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
A4FUC9        112 LIPLGLKETKDVdFSVALKDFILEHYSEDSYLYEDEIADLMDLRQACRTPSRNEAGVELLMSYFMQLGFVESRFFPPTRq 191  cattle
Q8TCX5        109 MIPLGLKETKELdWSTPLKELISVHFGEDGASYEAEIRELEALRQAMRTPSRNESGLELLTAYYNQLCFLDARFLTPARs 188  human
XP_002594268   51 MIPLGLKETKDVdFNVPFKDFILEHYSEDSSEYDGELKELHDLRRAMRTPERDEAGIELLMEYYNQLYYVEKRFFPPNRh 130  Florida lancelet
XP_785878      99 LIPLGLKETKKLdARVAFTDYILEHYSADADKYENEIKELAELRQSIRTPKRNEEGIELLLEYYNQLYFIENRFFPPDRn 178  purple urchin
XP_002435502  112 MIPLGLKETKDIdFKEPFKDFIMEHYSEDSSAYDGAIQEFMDVRQAARTPTRDQAGVQLLYEYYNLLYFVDRRFFPPNRs 191  black-legged ...
EFA06476      111 MIPLGLKETKEIdFRDPFKDFILEHYSEDANQYEDAIADFMDTRQAIRTPLRDTTGISLLFRYYNQLYFVERRFFPPDRs 190  red flour beetle
XP_002122928  104 LIPLGLKDTKELvFAQTFEDYISEHYSEDPSSFAEEIADFTDLRNSVRTPSRNQDGAVLLLEYYNQLYFIENRFFPPYKp 183  Ciona intesti...
XP_002425491  105 LIPLGLKETKEVdFKEPFKDFILEHYSEEGNLYSDVISQVMDLRQAIRTPLRDENGISLLFQYYNQLYFLERRFFPPDRs 184  human body louse
NP_511168     122 MIPLGLKETKEInFMEPFSDFILEHYSEEPSMYIDAIADMTDTRQASKTPSRDALGVALLFRYYNTLYYVERRFFPPDRn 201  fruit fly
XP_001626625  135 MIPLGLRETQDVdFCSQFKEFLQDHYDEDPEKYTEEFARYRKLRKTMCNPSRDKDGILSLYEYYNQMYFVERKFFPKRGs 214  starlet sea a...
XP_002111999  129 MITFGLKVGKPIkFMFAFKDIIRDHYHEDPDLYEDAIETFTKLRENALSATRSEAGLKNLIEYFNQLYFISKRFFRMRKi 208  Trichoplax ad...
Feature 1                                            #  #            #  ##                        
A4FUC9        192 MGILFTWYDSLtGVPVSQQnLLLEKASILFNIGALYTQIGTRCNRQtEAGLESTVDAFQRAAGVLNYLKETfTHTPSYDM 271  cattle
Q8TCX5        189 LGLFFHWYDSLtGVPAQQRaLAFEKGSVLFNIGALHTQIGARQDRScTEGARRAMEAFQRAAGAFSLLRENfSHAPSPDM 268  human
XP_002594268  131 LGIYFHWFDSLtGVPSSQRtVAFEKGSVLFNIGALYTQIGAKQDRTkKDGINAAIDAFQKAAGAFKYLQDNfSHAPSMDM 210  Florida lancelet
XP_785878     179 LGVYFHWYDALtGVPSLQKsVAFEKGSILFNISALFTQMGAKQDRTmGDGVSKAIECFESAAGAFKYLGENfSHAPSMDM 258  purple urchin
XP_002435502  192 MGIFFEWFDSLtGVPSTQKtVAFEKASVLFNIAALYTQIGAKQDRGkSAGIDSAVDSFLRAAGMFCYIRENfSKPPSMDL 271  black-legged ...
EFA06476      191 LGIYFEWFDSLtGVPSCQRtVAFEKACVLFNMGAIYTQIGAKQDRStAKGLDAAVDSFLRAAGTFRYIHENfTNAPSMDL 270  red flour beetle
XP_002122928  184 QGVFFHWYDSItGLPSVQRsVSLEKASVLFNLGALYSQIGTRADRTrRRGIEVAVSAFQQAAGSFNYLRLNfSNAPTPDL 263  Ciona intesti...
XP_002425491  185 LGIYFEWYDSLtGIPSYQRtVAFEKACVLFNIAAIYTQIAAKQDRKsISGLNSAIEAFLRSSGTLKYISENfTNAPSTDL 264  human body louse
NP_511168     202 LGVYFEWYDSLtGVPSCQRtIAFEKACTLFNLGGIYTQIGARHDRTtERGLDLAVDSFLRAAGVFRHIYDTfTNAPSMDL 281  fruit fly
XP_001626625  215 MAVYFHWYDAMtGLPKVQRsAAFEKASVMFNIGALWSQIGTKQDRGtAEGVEEACMAFQKAAGAFRFIRDNfMNSPSVDM 294  starlet sea a...
XP_002111999  209 FNIQFYWFDCLnGEPIIQKsISFEKASILYNIGALLTQLASKQNFVtVNGIYAAIQYYQRAAGAFNMLLENfKNAASFDL 288  Trichoplax ad...
Feature 1                            #  ##              #  ##                                     
A4FUC9        272 SpAMLSVLVKMMLAQAQESTFEKVclpg----lqneFFLLVKVAQEAAKVGEVYRQLHTAMnqePVKENIPySWASLACV 347  cattle
Q8TCX5        269 SaASLCALEQLMMAQAQECVFEGLsppas--mapqdCLAQLRLAQEAAQVAAEYRLVHRTMaqpPVHDYVPvSWTALVHV 346  human
XP_002594268  211 GlETLEALIKLMLAQVQECVFERRvldg----weenLTNCLTVAQESAKVSEAYSMVHKAMntpPVKDYVPfSWISMVLV 286  Florida lancelet
XP_785878     259 SgPVLAMLGGLMLAQVQECIFEKLvldg----veetIESCVRVAKEASVVSDMYTKVHKMMmqeTVKDYIPySWISMVLV 334  purple urchin
XP_002435502  272 SaETLEVLTHIMLAQARECLFEKLllsnv---ekqgVLACIEVGQEAAEVAEVYAQVHKLIsmpPVKDYVPySWISLILV 348  black-legged ...
EFA06476      271 GpEMLEMLVQLMLAQARECLLEKLdlqsk---esrsIDICLDLAQEAAHLADCYSQVYQLImteSVHDYVPySWISLVQV 347  red flour beetle
XP_002122928  264 ShSTLSALTWLMLAQGQECVLEMKvfggfeiqlgkcASIAQEAIKASFRVSDKYSLAFKSMnsdVTKEVIPySWINMTEV 343  Ciona intesti...
XP_002425491  265 NtEMLEMLGHLMQAQAKECFLEKLdlsqes-dedktIDELLDLAQEGSHVADIYTHVIKLIs--PVKCFVPyTWISLVTL 341  human body louse
NP_511168     282 KpQVLDVLVSLMLSQARECLFEKLqlqie--amshdCQAFRDLAGEAAQISHEYNEMHKNIqanDTHTYLPeCWAGLVPV 359  fruit fly
XP_001626625  295 TqDTLEALIPLMLVQAQACMWEKRrllhd---dvdgFQECIQAGQECAEISQGYKRVQLLMnsgICMDSIPtAWRNLVKI 371  starlet sea a...
XP_002111999  289 SeKMLRIYIKILKAQVQECYYGKIavtm----dsidIRTKVILCRESAIVGKCYQELFEFMqndASTKYIPeSWRSMSEV 364  Trichoplax ad...
Feature 1                                                                                         
A4FUC9        348 KAHHYEALAHYFTATLLIdhqlkpgededhqekcls-----------------------qlyshmpegltplatlknVHQ 404  cattle
Q8TCX5        347 KAEYFRSLAHYHVAMALCdgsrecpphlpmvlprppragsqplcppaategelptheqvflqpptsskprgpvlpqeLEE 426  human
XP_002594268  287 KSEHFKAQSHYLAAVGFIdqkgtsdndedelekll-------------------------sqvhlrdadspstlatdRED 341  Florida lancelet
XP_785878     335 KSQHFKARAHHYAAIAIVdydsetllrlfpsm--------------------------------ynteksdlqppqnWEE 382  purple urchin
XP_002435502  349 KAEHYRALAHYYIAVGLLehvgeldevvrrsmeflh------------------------vqeqsgstcidirvpqtLEE 404  black-legged ...
EFA06476      348 KKEYYTGMAHYHVASGVLhkeaakmspttkttlqf-------------------------lhaetastqldirlpkdDAE 402  red flour beetle
XP_002122928  344 KSHHYRALAHYYAALGLLdqhmaaeqleitnllssl-----------------------ymncddddvpkpddvarrKED 400  Ciona intesti...
XP_002425491  342 KVEYYMAMAHRFCGMALMntemknftadtierlkrv------------------------hyvsddklqidilfpknEDD 397  human body louse
NP_511168     360 KAELYKAFAHFYKARSIDatdelkaskssqknqesfi---------------------gnsqeverittadygasdeAST 418  fruit fly
XP_001626625  372 MSAHYKALSHYHTAAGLLqcpagetsglhe-----------------------------------mlsslyisdmdsGPK 416  starlet sea a...
XP_002111999  365 KSAIFTAVSHHFAAEVLMhyttstkvestqtflav-------------------------vesmygekcppelwkknHLL 419  Trichoplax ad...
Feature 1                                                                                        #
A4FUC9        405 RQLLGKSHLCQAVTHHEESMREASLCKKLRniDVLQEVLSAAHDRSQLKYTQLREDDDLLNLTDAPDi----vSKTEREV 480  cattle
Q8TCX5        427 RRQLGKAHLKRAILGQEEALRLHALCRVLRevDLLRAVISQTLQRSLAKYAELDREDDFCEAAEAPDi----qPKTHQKP 502  human
XP_002594268  342 RKQLGKAHLREALILHEDALRVHRMCKKLRqiDTLGTILKEAHNKSMTKYSDVEEEDEFYDEVIAPRi----qPKTHQRP 417  Florida lancelet
XP_785878     383 RMRLGKAHIRQALMLHEEALRVHDLSKQLRkiDTLKEVLKKFHSKSMHRYQSLDNEDDFFELPDAPVi----lSKTTQIA 458  purple urchin
XP_002435502  405 RRLLGKAHLREALLLHEEALRLHRMCRQLRqvDNLLGRLRADHDVALQRYSDLEEEDDFQEVLDPPQi----qASTKYQL 480  black-legged ...
EFA06476      403 RRLLGRAHLRESLVLHEECQRLHRMCRELRgkQALTAVLRNAHKTALQAYTNNENEDDFSDVLDPPRv----qAATKFQL 478  red flour beetle
XP_002122928  401 RRRLGKSHLKQSVFYHERALQTHSLCKIPRavDILKEYLQHAHTRSVNKLEEVDSDEDFFDIVEAPDi----qGHSHEDT 476  Ciona intesti...
XP_002425491  398 NQLLARAHLKESLLKFEETLRLHRMCRELKnkPGLETVLKTYHSLALNLYSKFEEKNDFRDVLEPPQi----iPLTKFTF 473  human body louse
NP_511168     419 SIANKLAHLKEALASIEEAQRLQRMCRFLKnkASLTEVMKEVHSKSQEELEKFRLQASAKNIEDGDLlersveASSKFTL 498  fruit fly
XP_001626625  417 RKKQAKAHLHAALRHHEEAMRARQVCRFCRrvLSLHKVLTVARDMSTNKLVGMEEEDDFDAPLAPTPv----kAYVRQKA 492  starlet sea a...
XP_002111999  420 RSALAKFHLTEAINKDKMAMKIRDRCIFLQqmKALQKILIRSHKISVNMISSIWNRNNGSLASVIPPqi---nGASQNQF 496  Trichoplax ad...
Feature 1          # # #            
A4FUC9        481 EIIVPQFSK--VTVTDFF 496  cattle
Q8TCX5        503 EARMPRLSQ--GKGPDIF 518  human
XP_002594268  418 EIKPPNFAN--VKVVDIF 433  Florida lancelet
XP_785878     459 KPHVPDFTR--VQVKDIF 474  purple urchin
XP_002435502  481 TLTSPDFTQ--YKVKDLF 496  black-legged tick
EFA06476      479 ALTPPDFAQ--YRVNDLF 494  red flour beetle
XP_002122928  477 TCIPPAFGE--VPSVDIF 492  Ciona intestinalis
XP_002425491  474 SIKQPDFAQ--YRVDDMF 489  human body louse
NP_511168     499 SLTGPDFTS--HKVKDPF 514  fruit fly
XP_001626625  493 FPISPEFHM--APVEDLF 508  starlet sea anemone
XP_002111999  497 QCVHPVFGKssDRSADLF 514  Trichoplax adhaerens

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