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Report for CCDS37648.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37648.1 Public Mus musculus 17 Daam2 23 108 98 CCDS HistoryNCBI Gene:76441Re-query CCDS DB by CCDS ID:37648.1Re-query CCDS DB by GeneID:76441See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37648.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057610.7 ENSMUSP00000052085.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057610.7Link to Ensembl Protein Viewer:ENSMUSP00000052085.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000057610Re-query CCDS DB by Protein ID:ENSMUSP00000052085
Original member Current member NCBI NM_001008231.2 NP_001008232.2 Accepted alive Link to Nucleotide Sequence:NM_001008231.2Link to Protein Sequence:NP_001008232.2Re-query CCDS DB by Nucleotide ID:NM_001008231Re-query CCDS DB by Protein ID:NP_001008232Link to BLAST:NP_001008232.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008232.2 1115 Q80U19-1 1115 100% 0 0

Chromosomal Locations for CCDS 37648.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 49458526 49458747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49459053 49459223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49460607 49460738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49462141 49462201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49463926 49464033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49464463 49464631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49469373 49469461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49469660 49469766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49471963 49472047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49473286 49473392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49474109 49474252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49476448 49476555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49479666 49479965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49480430 49480614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49480724 49480782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49482927 49483065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49485377 49485494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49486444 49486510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49488187 49488290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49488945 49489055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49489994 49490327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49493821 49493915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49494375 49494449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49496125 49496214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49498706 49498873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3348 nt):
ATGGCCCTCCGCAAGAGGAGTCCTCATGGCCTGGGCTTCCTTTGCTGCTTTGGAGGCAGTGACCTTCCCG
AG
ATCGACCTCCGGGACAGCCACCCACTGCAGTATCTGGAGTTCTCCGGTCCCATCCCGAATCCTGAGGA
G
CTCAATGTCCGCTTTGCAGAGCTGGTGGATGAATTGGACCTCACAGATAAAAACCGAGAGGCTGTGTTT
GCA
CTACCACCCGAGAAGAAATGGCAGATCTACTGCAGCAAGAGGAAGGAGCAGGAGGATCCCAACAAGC
TG
GCAACCAGTTGGCCTGAGTACTACATTGATCGTATCAATGCCATGGCCGCCATGCAGAATCTGTATGA
A
ACTGAAGATGAGGAGACAGACAAGAGGAACCAAGTTGTAGAAGACCTGAAGACAGCCCTCCGGACACAA
CCC
ATGAGGTTTGTGACCCGCTTCATCGATCTGGAAGGCCTGACCTGTCTGCTGAATTTCCTCCGGGGCA
TG
GACCACACCACCTGTGAAAGCCGCATCCACACATCTCTCATTGGCTGCATCAAGGCTCTGATGAACAA
C
TCTCAGGGCCGGGCACACGTCCTGGCACAACCTGAGGCCATCAGCATCATCGCTCAGAGCCTGCGCACA
GAG
AACAGCAAGACCAAAGTTGCAGTGCTGGAGATCCTGGGTGCAGTGTGCCTTGTACCCGGAGGCCACA
AG
AAGGTTCTACAGGCCATGCTACACTATCAGGCGTATGCAGCCGAGCGCACTCGTTTCCAGACTTTGCT
G
AATGAACTGGATCGAAGCTTAGGCCGCTACCGGGATGAGGTAAACCTGAAGACAGCCATCATGTCCTTC
ATC
AATGCTGTCCTCAATGCTGGCGCTGGAGAGGATAACCTGGAATTCCGCCTGCATCTCCGGTATGAGT
TC
CTGATGCTGGGGATCCAGCCAGTGATTGATAAACTCCGGCAACACGAGAATGCCATCCTGGACAAGCA
T
TTAGACTTCTTTGAGATGGTCCGGAATGAGGATGACCTGGAGCTAGCCAGGAGGTTTGACATGGTCCAC
ATT
GACACAAAAAGTGCCTCCCAGATGTTTGAGCTGATCCACAAGAAGCTGAAGCACACGGAAGCCTATC
CC
TGCCTGCTCTCTGTCCTGCACCACTGCCTGCAGATGCCCTACAAGCGGAATGGTGGCTACTTCCAGCA
G
TGGCAGCTCCTGGACCGAATCCTTCAACAGATTGTCCTCCAGGATGAGCGAGGGGTGGACCCTGACCTG
GCC
CCACTGGAAAACTTTAATGTCAAGAACATCGTTAACATGCTCATCAATGAGAATGAGGTGAAGCAGT
GG
AGGGACCAGGCAGAGAAGTTTCGGAAAGAACACATGGAACTCATGAGCCGGCTGGAGAGAAAAGAGCG
G
GAATGTGAGACAAAGACACTGGAGAAGGAGGAGATGATGCGGACGCTCAACAAGATGAAGGACAAACTG
GCC
CGCGAGTCCCAGGAGCTGCGCCAAGCTAGGGGACAAGTGGCAGAGCTGGTAGCCCGACATAATGAGA
GC
TCAACCGGCCCGGTGTCCTCCCCACCTCCCCCTGGAGGTCCACTCACCTTGTCTTCCTCCAGGACAAC
C
AATGATCTGCCTCCACCCCCACCACCTCTCCCCTTTGATAGCTGCCCACCCCCACCCGCACCACCCCTC
CCT
CCCGGAGGGCCTCCCATCCCCCCAGGTGCCCCACCCTGCTTCAGCTCAGGCCCACCCCCATCTCATG
AC
CCCTTCTCCAGCAATGAAGCCCCACTCAGGAAAAAGCGCATTCCCCAGCCTTCACACCCACTGAAGTC
C
TTCAACTGGGTCAAGCTGAATGAGGAGCGTGTTTCTGGCACCGTGTGGAATGAAATTGATGACTCGCAG
GTA
TTTCGGATTCTGGACCTGGAAGACTTTGAAAAAATGTTCTCGGCATATCAGAGGCACCAGGCTTGCA
TG
CAGGAGGGGCCCCAGAGAGAGAGAGGAAATGTGAGAGACGGAGGGGCGGCGAGCAGACCTCTGCCAGC
T
GTGGAGGCGAGTGCCCACAGAACTGAGAAGGCTTCTAGGTCTATGGTATCAGCTACAGGTGCCAAGAAA
GAA
CTGGGCTCCACGGAGGACATCTACATAACCTCCCGCAAGGTTAAAGAGCTGTCAGTCATCGATGGCC
GG
AGGGCCCAGAACTGTATCATTCTTCTCTCCAAGCTGAAGCTTTCTAATGATGAAATACGGCAGGCCAT
C
TTGCGGATGGATGAACAAGAAGACCTCGCTAAGGACATGCTGGAGCAGCTTCTCAAGTTCATCCCCGAG
AAG
AGCGACATTGATCTCCTAGAAGAGCACAAACATGAGATTGAGAGGATGGCGCGTGCAGATCGCTTCC
TC
TATGAAATGAGCAGGATCGACCATTACCAGCAACGGCTACAGGCCCTGTTCTTCAAGAAGAAGTTCCA
G
GAACGCCTGGCTGAGGCCAAGCCCAAAGTAGAAGCCATCCTGCTGGCCTCCCGGGAGCTGACTCTCAGC
CAG
CGCCTGAAGCAAATGCTGGAGGTGGTCCTAGCCATCGGCAACTTCATGAACAAGGGGCAGCGTGGCG
GT
GCCTATGGCTTCCGGGTAGCCAGTCTCAACAAGATCGCTGACACCAAGTCCAGCATTGACAGGAACAT
C
TCTCTGCTTCATTACCTGATCATGATCCTGGAGAAGCACTTCCCAGATATCCTGAACATGCCCTCAGAG
CTA
AAGCACCTATCAGAAGCTGCCAAAGTCAACCTGGCAGAGCTGGAGAAGGAGGTGAGCATTCTCAGGA
GA
GGCCTCCGAGCAGTGGAAGTGGAGTTGGAATATCAGAGACACCAGGCACGAGACCCCAATGACAAGTT
C
GTCCCTGTCATGAGTGACTTCATCACAGTGTCTAGCTTCAGCTTCTCAGAGCTGGAGGACCAGCTGAAT
GAG
GCCAGGGACAAGTTTGCCAAGGCACTGACACATTTCGGAGAGCAGGAGAGTAAGATGCAACCGGATG
AA
TTCTTTGGCATCTTCGACACCTTCCTGCAGGCCTTCTTGGAGGCCCGGCAGGACCTGGAGGCCATGCG
G
AGGAGGAAGGAGGAAGATGAGCGGAGAGCACGTATGGAATTCATGTTGAAGGAACAGCGTGAGAAAGAG
AGA
TGGCAGAGGCAGAGGAAGGTCTTGGCTGGCGGCGCCCTGGAGGAGAGCGGCGAGTTTGATGACCTAG
TG
TCAGCCCTGCGCTCTGGAGAAGTTTTCGATAAGGACTTAAGCAAGTTCAAGCGCAACCGGAAGCGGCC
C
GGGAGCCAGGTTCCGGAGGTCACCCGCGAGCGGGCCATAAACAGGCTAAATTATTGA


Translation (1115 aa):
MALRKRSPHGLGFLCCFGGSDLPEIDLRDSHPLQYLEFSGPIPNPEELNVRFAELVDELDLTDKNREAVF
A
LPPEKKWQIYCSKRK
EQEDPNKLATSWPEYYIDRINAMAAMQNLYETEDEETDKRNQVVEDLKTALRTQ
P
M
RFVTRFIDLEGLTCLLNFLRGMDHTTCESRIHTSLIGCIKALMNNSQGRAHVLAQPEAISIIAQSLRT
E
NSKTKVAVLEILGAVCLVPGGHKKVLQAMLHYQAYAAERTRFQ
TLLNELDRSLGRYRDEVNLKTAIMSF
I
NAVLNAGAGE
DNLEFRLHLRYEFLMLGIQPVIDKLRQHENAILDKHLDFFEMVRNEDDLELARRFDMVH
I
DTKSASQMFELIHKKLKHTEAYPCLLSVLHHCLQMP
YKRNGGYFQQWQLLDRILQQIVLQDERGVDPDL
A
PLENFNVKNIVN
MLINENEVKQWRDQAEKFRKEHMELMSRLERKERECETKTLEKEEMMRTLNKMKDKL
A
RESQELRQARGQVAELVARHNESS
TGPVSSPPPPGGPLTLSSSRTTNDLPPPPPPLPFDSCPPPPAPPL
P
PGGPPIPPGAPPCFSSGPPPSHDPFSSNEAPLRKKRIPQPSHPLKSFNWVKLNE
ERVSGTVWNEIDDSQ
V
FRILDLEDFEKMFSAYQRHQ
ACMQEGPQRERGNVRDGGAASRPLPAVEASAHRTEKASRSMVSATGAKK
E
LGSTEDIYITSRKVKELSVIDGRRAQNCIILLS
KLKLSNDEIRQAILRMDEQEDLAKDMLEQLLKFIPE
K
SDIDLLEEHKHEIERMARADRFLYEMS
RIDHYQQRLQALFFKKKFQERLAEAKPKVEAILLASRELTLS
Q
RLKQMLEVVLAIGNFMNKGQRGGAYGFRVASLNKIADTKSSID
RNISLLHYLIMILEKHFPDILNMPSE
L
KHLSEAAKV
NLAELEKEVSILRRGLRAVEVELEYQRHQARDPNDKFVPVMSDFITVSSFSFSELEDQLN
E
ARDK
FAKALTHFGEQESKMQPDEFFGIFDTFLQAFLEARQDLEAMRRRKEEDERRARMEFMLKEQREKE
R
WQRQRKVLAGGALEESGEFDDLVSALRSGEVFDKDLSKFKRNRKRPGSQVPEVTRERAINRLNY




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser