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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS28505.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
28505.1 |
Public |
Mus musculus |
17 |
Ift140 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 28505.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000024983.11 |
ENSMUSP00000024983.5 |
Accepted |
alive |
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NCBI |
NM_134126.3 |
NP_598887.3 |
Updated |
not alive |
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NCBI |
NM_134126.4 |
NP_598887.3 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_598887.3 |
1464 |
E9PY46 |
1464 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 28505.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4395 nt): ATGGCTCTGTATTTTGACCACCGAATCAAAGCTCCAGACACACCCAGCTCTCCCTCCCACATCACCTGGC ACCCCACCCACCCATTCCTGGCAGTCGCATCTATAAGCCCATCTTCTGGAGGCAACGTAGACATCTACCT TGAGCAAGGTGAGCCCGTGCCTGACACCCACATTGAGAGGTCTTTCCAGGCCACTTCACTGTGCTGGCAC CCAACAAGGCTTATCCTGGCTATTGGCTGGGAAACTGGAGAAGTGATAATGTTTAATAAGCAGGACAAGG AACAGCACACAGTGCCCCTGCCACATACGACTGACATTGCCATCCTCAGTTGGAGCACCAGTGGGAGCTG CCTGGTATCTGGAGATAAGCTTGGGGTCCTGCTCTTGTGGAGATTGGACCAGCGAGGCCGAGTACAGGGA ACACCACTCCTGAAACACGAATATGGGAAAGCACTCACCCATTGCATCTTCCGGCTCCCCCCTCCTGGGG AGGATCTGGTTCAGTTGGCAAAGGCAGCAGTAAGCGGGGATGAGAAAGCCCTGGACATGTTTAACTGGAG AAAAAGCAGCTTTGGAAGTTTCCTGAAGACGGGGTCTCAAGAGGGGCTGTCTTTCTTTGTCAGTCTCATG GATGGCACAGTGCACTATGTGGATGAAAAGGGCAAGACTGCCCAGGTGGCATCCACAGACAGCTCCATCC AGACCCTGTTCTACATTGAGAGGAGAGAGGCACTGGTTGTGGTCACAGAGAACCTTCTCCTGTCTCTGTA TGTGGTGACTCCTGAGGGAGAAGCTGAAGAAGTCATGAAGGTAAAGTTGAGTGGGAAGACAGGCTGCCGG GCAGATATCACTTTGATAGAGGGCAGCCTTCTGGTGACAGCTATTGGGGAGCCTGTGCTCAGGTTCTGGG ACTTAGAACGGGGAGAGAATTACATACTGAGTCTACAGGAGAAGTTTGGCTTTGAAAAGGGAGAGAGTAT AAACTGTGTGTGTTTCTGTAAAGCCAAAGGTCTCCTAGCAGCAGGTACCAATAAAGGACGAGTAGCTATG TGGAAAAAAGTGCCAAGCTTCCCAAATGGCCGTGGGGCGGAGGGCAAGGACATGTGGGCCCTTCAGACCC CTACTGAGCTTGAAGGGAACATCACACAGATAAAGTGGGGCTCCAGGAAGAACCTTCTGGCAGTGAGCAG CACCGAGTCTGTGTCCATCCTCAGTGAGCAAGCCATGTCGTCACACTTCCACCAGCAAGTAGCTGCCGTG CAGATCTCCCCGAGCCTAGTCAACGTGTCTTTCCTGTCCACGGGGGGCACACACAGCCTGCACACCGACA TGCACATCAGTGGAGTGTTCGCCACCAAGGATGCTGTGGCTGTCTGGAATGGAAAACAGGTGGCGATCTT TGAACCTTCAGGATCCACCTTAAGGAATGCAGGGACATTCCTGTGTGAAACATCAGTGCTAGCCATGCAT GAGGAAAGCATTTACACCGTGGAGCCAAACCGACTCCAAGTCCGGACCTGGCAGGGGACTGTCAAACAAC TTCTGCTATTCTCTGAGACCGAGGGGAGCCCCTGCTTCCTGGACGTCTGTGGGACTTTCCTGGTTGCAGG GACAGATTTAGCTCATTTTAAAAGTTTTGATCTTTCCAGAAGGGAAGCAAAAGTGCACTGCAGCTGCAAG AACCTGGCCCAGCTGGTCCCTGATGTGGGGAGCATCACTTCTCTGAGATGCAATGCAAATGGGAACAAGA TCAGCATCCTCCTTAGCAAGGTCAACAACAGTCCTGATTCCAAAATCTACATCTATGATGTTGAAATGGA CACAGTGAACGTCTTCAACTTCACAACTGGACAGATTGGACAGATACAGACTCTGCCCTTTAACGAGCCG CCGACTAATGAGACCCGTTCCTTTATGGACAAGAGCCTAGCAGGTTACACGCCGGTGAACCATTTCTGGG ATCAGAGTGAGCCCAGGCTCTTTGTGTGCGAGGCCTTGCAGGAGGCCCCTGGAGCCCAGCCACAGGCTGT AGACAAGCAGCCCCGTGTAGAGGAGGGCACATGCCACAAGGAAGAAGTGTTGATTCTCTCCTTCTTTGCT TCTGAAGAGCATGGCTTTCTGCTCCATGACAGCTTCCCCCGGCCTTCAACCTACCAGAGCCTTCTGGGCA TGGAAGTGCCTCACTATTACTTCACAAAAAAGCCTGGAGAAGCAGACAAAGAAGACAGGGTGGATTCTGG GTACTACCACATCCCTCAGATGGTAGCCAAGAGGCCCCTACGAGACTTTGTGGGGCTGGAGGACTGTGAC AAGTCTACTCGGGATGCCATGCTCAACTTTAGCTTCTTTGTCACCATTGGAGACATGGATGAAGCTTTCA AGTCTATCAAACTCATCAAGAGTGAGGCTGTCTGGGAGAACATGGCACGCATGTGTGTGAAGACTCAACG GCTAGATGTTGCCAAGGTGTGCCTAGGGAACATGGGCCACGCCCGTGGGGCCCGAGCACTGCGGGAAGCT GAGCAGGAGCCAGAACTGGAAGCCAGAGTGGCCATGCTGGCCATACAGCTGGGCATGCTGGAGGAGGCAG AACAACTGTATAAGAAGTGCAAACGCTACGACCTCCTGAACAAGTTCTACCAGGCCTCAGACCAGTGGCA GAAAGCTGTGGAGGTTGCGGAGCTCCACGACCGTGTCCACCTGCGCACCACCTACTACAACTACGCCAAG CACCTGGAGGCCAGCGCTGACTGTGGCCAGGCCCTCAGTTATTATGAGAAGTCAGACACCCACCGTTTTG AGGTACCTAGGATGCTCTCAGAAGACCTGCAGTCCCTGGAGCTCTACATCAATAGGATGAAGGACAAGAC CCTCTGGAGATGGTGGGCCCAGTATCTTGAGAGCCAGGCAGAGATGGACACTGCACTGCGCTACTATGAG CTGGCGCAGGACTACTTCTCCCTGGTCCGTATTCACTGCTTCCAGGGCAACATTCAGAAGGCTGCTGAAA TAGCCAACGAGACTGGAGACTGGGCTGCATCCTACCACCTTGCCCGGCAGTACGAGAGCCAGGATGAGGT AAAACAGGCAGTGCACTTCTACACTCGGGCACAGGCTTTCAACAACGCCATCCGCCTGTGCAAGGAGAAC GGCTTAGATGACCAGCTCATGAACTTGGCGCTGTTGAGTTCCCCAGAGGACATGATTGAGGCAGCCCGGT ATTATGAGGAGAAGGGCGAGCAGATGGACAGGGCTGTCATGCTGTACCACAAGGCTGGACACTTTTCCAA GGCCCTGGAGCTGGCCTTCACCACCCAGCAGTTTGCAGCACTACAGCTCATAGCCGAGGACCTGGATGAG AAGTCAGATCCTGCTCTCCTGGCCCGCTGCTCAGACTTCTGCATTGAGCACAGGCAGTTTGAAAAGGCTG TGGAGCTTCTCCTGGCTGCCAAGAAGTACCATGAGGCTCTGCAGCTGTGCCTTGAGCAGAACATGACCAT CACTGAGGACATGGCAGAGAAGATGACTGTGTCCAAGGACTCAAAGGACATGTCTGAGGAGTCACGGCGT GAGCTTCTGGAGCAGATTGCCAACTGCTGTATGCGCCAGGGCAACTATCACCTGGCCACCAAGAAGTACA CACAGGCTGGGAACAAGCTAAAGGCCATGAGAGCACTGCTCAAATCTGGAGACACAGAGAAAATTGTGTT CTTTGCGGGTGTCTCAAGACAGAAGGAAATCTACATCATGGCTGCCAATTACCTACAGTCCCTGGACTGG CGGAAGGAGCCAGAGATCATGAAGAGTATCATTAGCTTCTACACCAAAGGGCGGGCCTTGGACCTCCTGG CTGGCTTCTATGATGCCTGTGCCCAGGTGGAGATTGACGAATACCAGAACTATGACAAGGCCCATGGAGC ACTGACTGAGGCCTATAAGTGCCTGTCCAAAGCCAAGACCAAGAACCCCCTGGACCAGGAGACCAAGCTA GCCCAGCTACAGAGCAAGATGACACTGGTGAAGAGGTTCATCCAGGCCCGAAGGACATACACAGAGGACC CCAAAGAGTCCCTCAGGCAGTGTGAGCTGCTCCTAGAAGAGCCAGACCTGGACAGCACCATCCGTGTCGG AGACGTCTATGGCTTCCTGGTGGAACACCATGTACAGATGGAGGAATACCAGATGGCCTATAAGTATCTT GAGGAGATGAGGAAAAGACTTCCTTCCGCCAACATGTCATACTATGTGGACCAGCGCACTGTGGACACTG TGCACCAGGGCCTGGGCCTCCTCCCTCCATCTCGTATCATGCCTGAGCGGGTCCGCCACAATAGCATGGA GGACCATAAGGAGGTGTACGAGGAGGTGATAGAAGAGGTGGACAATGACCCCTGA
Translation (1464 aa): MALYFDHRIKAPDTPSSPSHITWHPTHPFLAVASISPSSGGNVDIYLEQGEPVPDTHIERSFQATSLCWH PTRLILAIGWETGEVIMFNKQDKEQHTVPLPHTTDIAILSWSTSGSCLVSGDKLGVLLLWRLDQRGRVQG TPLLKHEYGKALTHCIFRLPPPGEDLVQLAKAAVSGDEKALDMFNWRKSSFGSFLKTGSQEGLSFFVSLM DGTVHYVDEKGKTAQVASTDSSIQTLFYIERREALVVVTENLLLSLYVVTPEGEAEEVMKVKLSGKTGCR ADITLIEGSLLVTAIGEPVLRFWDLERGENYILSLQEKFGFEKGESINCVCFCKAKGLLAAGTNKGRVAM WKKVPSFPNGRGAEGKDMWALQTPTELEGNITQIKWGSRKNLLAVSSTESVSILSEQAMSSHFHQQVAAV QISPSLVNVSFLSTGGTHSLHTDMHISGVFATKDAVAVWNGKQVAIFEPSGSTLRNAGTFLCETSVLAMH EESIYTVEPNRLQVRTWQGTVKQLLLFSETEGSPCFLDVCGTFLVAGTDLAHFKSFDLSRREAKVHCSCK NLAQLVPDVGSITSLRCNANGNKISILLSKVNNSPDSKIYIYDVEMDTVNVFNFTTGQIGQIQTLPFNEP PTNETRSFMDKSLAGYTPVNHFWDQSEPRLFVCEALQEAPGAQPQAVDKQPRVEEGTCHKEEVLILSFFA SEEHGFLLHDSFPRPSTYQSLLGMEVPHYYFTKKPGEADKEDRVDSGYYHIPQMVAKRPLRDFVGLEDCD KSTRDAMLNFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGARALREA EQEPELEARVAMLAIQLGMLEEAEQLYKKCKRYDLLNKFYQASDQWQKAVEVAELHDRVHLRTTYYNYAK HLEASADCGQALSYYEKSDTHRFEVPRMLSEDLQSLELYINRMKDKTLWRWWAQYLESQAEMDTALRYYE LAQDYFSLVRIHCFQGNIQKAAEIANETGDWAASYHLARQYESQDEVKQAVHFYTRAQAFNNAIRLCKEN GLDDQLMNLALLSSPEDMIEAARYYEEKGEQMDRAVMLYHKAGHFSKALELAFTTQQFAALQLIAEDLDE KSDPALLARCSDFCIEHRQFEKAVELLLAAKKYHEALQLCLEQNMTITEDMAEKMTVSKDSKDMSEESRR ELLEQIANCCMRQGNYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDW RKEPEIMKSIISFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAYKCLSKAKTKNPLDQETKL AQLQSKMTLVKRFIQARRTYTEDPKESLRQCELLLEEPDLDSTIRVGDVYGFLVEHHVQMEEYQMAYKYL EEMRKRLPSANMSYYVDQRTVDTVHQGLGLLPPSRIMPERVRHNSMEDHKEVYEEVIEEVDNDP
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