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Report for CCDS79267.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79267.1 Public Mus musculus 14 Ppp3cb 23 108 98 CCDS HistoryNCBI Gene:19056Re-query CCDS DB by CCDS ID:79267.1Re-query CCDS DB by GeneID:19056See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79267.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022355.10 ENSMUSP00000022355.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022355.10Link to Ensembl Protein Viewer:ENSMUSP00000022355.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022355Re-query CCDS DB by Protein ID:ENSMUSP00000022355
Original member Current member NCBI NM_001310427.1 NP_001297356.1 Accepted alive Link to Nucleotide Sequence:NM_001310427.1Link to Protein Sequence:NP_001297356.1Re-query CCDS DB by Nucleotide ID:NM_001310427Re-query CCDS DB by Protein ID:NP_001297356Link to BLAST:NP_001297356.1

Chromosomal Locations for CCDS 79267.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20501484 20501662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20508624 20508721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20509416 20509500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20515523 20515600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20520554 20520679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20523580 20523674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20523779 20523856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20523960 20524099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20524357 20524502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20528158 20528269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20530944 20531068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20531660 20531860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20546356 20546440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1548 nt):
ATGGCCGCCCCGGAGCCGGCCCGGGCCGCGCCGCCCCCGCCCCCGCCCCCACCGCCCCCTCTCGGGGCCG
AC
CGCGTCGTCAAAGCTGTTCCTTTTCCCCCAACTCATCGGCTGACATCTGAAGAAGTGTTTGATATGGA
T
GGGATACCCAGGGTTGATGTTCTGAAGAACCACTTGGTAAAAGAAGGGCGGGTGGATGAAGAAATTGCA
CTA
AGAATTATCAATGAGGGTGCTGCCATACTTCGGCGGGAGAAAACCATGATAGAAGTAGAAGCTCCAA
TT
ACAGTGTGTGGTGACATCCATGGCCAATTTTTTGATCTGATGAAACTTTTTGAAGTAGGAGGATCACC
T
GCTAATACACGATACCTTTTTCTTGGTGATTATGTGGACAGAGGTTATTTTAGTATAGAGTGTGTCTTA
TAT
TTATGGGTCTTGAAGATTCTATACCCAAGCACATTATTCCTTCTGAGAGGCAACCATGAATGCAGAC
AC
CTTACTGAATATTTTACCTTTAAGCAGGAATGTAAAATTAAATATTCAGAAAGAGTCTATGAAGCTTG
T
ATGGAGGCTTTTGACAGCTTGCCCCTTGCTGCACTTCTAAACCAACAATTTCTTTGTGTTCATGGTGGA
CTT
TCACCAGAAATACACACACTGGATGATATTAGGAGATTAGATAGATTTAAAGAGCCACCTGCATTTG
GA
CCAATGTGTGACTTGCTATGGTCTGATCCTTCTGAAGACTTTGGAAATGAAAAATCACAAGAACATTT
T
AGTCATAATACAGTTCGAGGATGTTCTTATTTTTATAACTATCCAGCAGTGTGTGAATTTTTGCAAAAC
AAT
AATTTGTTATCGATTATTAGAGCTCATGAAGCTCAAGATGCAGGCTATAGAATGTACAGAAAAAGTC
AA
ACTACAGGGTTTCCTTCATTAATAACAATTTTTTCGGCACCTAATTACTTAGATGTCTACAATAATAA
A
GCTGCTGTACTAAAGTATGAAAATAATGTGATGAACATTCGACAGTTTAATTGCTCTCCACATCCTTAT
TGG
TTGCCCAATTTTATGGATGTCTTTACATGGTCTTTACCATTTGTTGGAGAAAAAGTGACAGAAATGT
TG
GTAAATGTTCTGAGTATTTGTTCTGATGATGAACTAATGACAGAAGGTGAAGACCAGTTTGATGTAGG
T
TCAGCTGCAGCCCGGAAAGAAATCATAAGAAACAAGATCCGAGCAATTGGCAAGATGGCAAGAGTCTTC
TCT
GTTCTCAGGGAGGAGAGTGAAAGCGTGCTGACACTCAAGGGCCTGACTCCCACAGGGATGTTGCCTA
GT
GGAGTGTTGGCTGGAGGACGGCAGACCTTGCAAAGTGCAATACGAGGATTCTCTCCACCACATAGAAT
C
TGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGGATCAATGAGAGAATGCCACCCCGGAAAGATGCTGTG
CAG
CAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAACCACGGGACTGGCAACCATAGTG
CC
CAGTGA


Translation (515 aa):
MAAPEPARAAPPPPPPPPPPLGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIA
L
RIINEGAAILRREKTMIEVEAPIT
VCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVL
Y
LWVLKILYPSTLFLLRGNHECRHLTEYFTFKQE
CKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGG
L
SPEIHTLDDIRR
LDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQN
N
NLLSIIRAHEAQDA
GYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPY
W
LPNFMDVFTWSLPFVGEK
VTEMLVNVLSICSDDELMTEGEDQFDVGSAAARKEIIRNKIRAIGKMARVF
S
VL
REESESVLTLKGLTPTGMLPSGVLAGGRQTLQSAIRGFSPPHRICSFEEAKGLDRINERMPPRKDAV
Q
QDGFNSLNTAHTTENHGTGNHSAQ




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser