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Report for CCDS43209.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43209.1 Public Homo sapiens 4 KIAA0232 24 110 108 CCDS HistoryNCBI Gene:9778Re-query CCDS DB by CCDS ID:43209.1Re-query CCDS DB by GeneID:9778See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43209.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307659.6 ENSP00000303928.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307659.6Link to Ensembl Protein Viewer:ENSP00000303928.5Re-query CCDS DB by Nucleotide ID:ENST00000307659Re-query CCDS DB by Protein ID:ENSP00000303928
Original member Current member EBI ENST00000425103.5 ENSP00000413739.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425103.5Link to Ensembl Protein Viewer:ENSP00000413739.1Re-query CCDS DB by Nucleotide ID:ENST00000425103Re-query CCDS DB by Protein ID:ENSP00000413739
Original member Current member NCBI NM_001100590.2 NP_001094060.1 Accepted alive Link to Nucleotide Sequence:NM_001100590.2Link to Protein Sequence:NP_001094060.1Re-query CCDS DB by Nucleotide ID:NM_001100590Re-query CCDS DB by Protein ID:NP_001094060Link to BLAST:NP_001094060.1
Original member Current member NCBI NM_014743.3 NP_055558.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014743.3Link to Protein Sequence:NP_055558.2Re-query CCDS DB by Nucleotide ID:NM_014743Re-query CCDS DB by Protein ID:NP_055558Link to BLAST:NP_055558.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094060.1 1395 Q92628 1395 100% 0 0
NP_055558.2 1395 Q92628 1395 100% 0 0

Chromosomal Locations for CCDS 43209.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 6824454 6824684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6842067 6842204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6857164 6857230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6858425 6858506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6860901 6864183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6871574 6871682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6876660 6876757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6880787 6880966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4188 nt):
ATGTACCCTATCTGTACAGTTGTTGTGGATGGTTTGCCATCTGAAAGCTCCTCAAGTTCTTATCCAGGCC
CT
GTGTCTGTTTCTGAAATGTCTCTGCTTCATGCTTTGGGTCCAGTGCAGACCTGGCTGGGACAAGAGCT
C
GAGAAATGTGGCATTGATGCCATGATTTACACTCGGTATGTCCTCAGTCTTCTGCTGCATGACAGCTAT
GAC
TACGACCTGCAGGAACAGGAGAATGACATCTTCCTGGGCTGGGAAAAAGGAGCTTATAAGAAATGGG
GA
AAGAGTAAGAAAAAATGTTCAGATCTAACTCTAGAAGAAATGAAAAAACAGGCTGCTGTCCAGTGTCT
T
CGATCTGCTTCTGATGAAAGCTCTGGTATCGAGACTTTAGTGGAGGAGCTCTGCTCCAGACTGAAAGAC
CTT
CAGAGTAAGCAAGAAGAGAAGATTCACAAAAAGTTAGAGGGGTCTCCCTCTCCAGAGGCAGAATTAT
CC
CCTCCAGCAAAGGATCAAGTGGAAATGTACTATGAAGCATTTCCACCACTTTCTGAGAAACCAGTTTG
C
CTGCAAGAAATCATGACTGTGTGGAACAAGTCTAAAGTCTGTTCTTACTCTAGCTCTTCTTCATCATCC
ACA
GCCCCACCAGCTAGCACAGATACTTCCTCTCCTAAGGACTGCAACAGTGAAAGTGAAGTCACCAAGG
AA
AGAAGCAGTGAAGTACCCACCACTGTGCATGAGAAAACCCAGAGCAAAAGCAAAAACGAGAAGGAAAA
C
AAATTTAGTAATGGCACAATTGAAGAAAAGCCTGCTTTGTACAAAAAGCAAATCCGACATAAACCTGAA
GGA
AAGATTCGCCCTCGCTCGTGGTCTTCTGGCTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGG
GA
GAATTAAAAGCATCCATGAAGTATGTTAAAGTAAGACACAAGGCACGAGAGATTCGAAACAAAAAAGG
G
CGGAATGGGCAAAGCAGGCTTTCTTTGAAGCACGGTGAAAAGGCTGAAAGGAACATTCATACTGGAAGT
AGT
AGCAGTAGCAGCAGTGGTTCTGTCAAACAGCTGTGCAAGCGGGGTAAGAGACCTTTAAAAGAAATAG
GG
AGAAAAGATCCTGGGAGCACTGAAGGAAAAGACCTGTACATGGAGAATAGAAAGGACACAGAGTATAA
A
GAGGAGCCCTTGTGGTACACCGAGCCAATTGCTGAATATTTTGTTCCTCTGAGCAGAAAAAGTAAACTA
GAG
ACCACATACCGAAACAGACAGGATACAAGTGATCTGACATCAGAGGCAGTGGAAGAATTGTCTGAAT
CA
GTGCATGGTCTTTGTATCAGCAACAATAATCTTCATAAAACATACCTCGCAGCAGGTACTTTCATTGA
T
GGTCATTTTGTAGAAATGCCTGCAGTTATAAATGAGGATATTGACCTCACTGGGACCTCATTATGTTCT
CTA
CCAGAGGACAATAAATACCTGGATGATATTCATCTATCAGAATTAACGCACTTCTATGAAGTGGATA
TT
GATCAATCCATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGAGAAAGTCGGATTTTGAATATGAT
T
CGACAGAAAAGCAAAGAGAACACAGATTTTGAGGCAGAATGTTGCATAGTGTTAGATGGTATGGAGTTG
CAA
GGGGAACGTGCAATATGGACAGATTCTACCAGCTCCGTAGGTGCTGAGGGCTTATTCCTGCAGGACC
TT
GGCAATCTGGCTCAGTTTTGGGAGTGCTGTTCATCCAGCTCCGGTGATGCTGATGGGGAGAGTTTTGG
A
GGAGACTCTCCAGTTAGACTCTCTCCCATCTTAGACAGCACAGTGCTCAATTCACACCTGCTTGCTGGC
AAT
CAAGAGCTCTTTTCAGATATTAATGAAGGATCTGGTATAAACTCTTGTTTTTCAGTGTTTGAAGTGC
AA
TGCAGTAATTCTGTTTTACCATTTTCTTTTGAAACACTCAACTTGGGAAATGAAAATACAGATTCTAG
T
GCTAATATGCTTGGGAAAACACAGTCTAGATTGCTAATATGGACCAAAAATAGTGCCTTTGAAGAAAAT
GAA
CACTGTTCTAATCTTTCAACAAGAACTTGTAGTCCATGGTCCCATTCAGAAGAAACACGTTCAGACA
AT
GAAACATTAAATATTCAGTTTGAAGAATCCACACAGTTTAATGCCGAAGATATTAATTATGTAGTTCC
T
AGAGTCTCGTCAAATTATGTAGATGAAGAACTTCTAGATTTTTTGCAAGATGAAACTTGCCAGCAAAAC
AGT
AGAACTTTAGGTGAGATTCCTACATTAGTTTTCAAAAAAACATCTAAACTAGAATCCGTCTGTGGTA
TT
CAGCTAGAACAAAAAACAGAAAACAAAAATTTTGAAACTACACAAGTATGTAATGAAAGTCCACATGG
A
GATGGCTACAGCTCAGGGGTTATTAAAGACATTTGGACAAAGATGGCAGACACAAATTCTGTGGCTACA
GTA
GAAATAGAAAGAACTGATGCTGAGTTGTTTTCGGCAGATGTAAATAACTACTGCTGCTGTCTAGATG
CT
GAAGCTGAACTGGAGACCCTTCAGGAGCCTGATAAGGCTGTGCGGAGGTCAGAGTACCATCTGTGGGA
G
GGACAGAAAGAGAGCCTGGAGAAAAGAGCATTTGCTTCTAGTGAGCTATCAAACGTGGATGGTGGTGAT
TAT
ACAACACCCTCTAAACCCTGGGATGTAGCCCAAGATAAAGAAAACACATTCATTCTTGGAGGAGTTT
AT
GGAGAACTCAAAACCTTCAATAGTGATGGGGAGTGGGCAGTCGTACCACCTAGTCACACAAAAGGAAG
T
CTGTTACAGTGTGCAGCTTCTGATGTTGTGACGATAGCTGGTACAGATGTCTTTATGACCCCAGGAAAC
AGT
TTTGCTCCTGGGCACAGGCAGTTATGGAAACCCTTCGTGTCATTTGAACAGAATGATCAGCCGAAGA
GT
GGGGAAAATGGGTTAAATAAGGGATTTTCTTTTATCTTCCATGAAGACTTACTAGGAGCTTGTGGCAA
C
TTTCAAGTCGAAGATCCTGGACTTGAATACTCATTTTCTTCCTTTGACTTAAGCAATCCATTTTCACAA
GTT
CTTCATGTAGAATGCTCATTTGAACCTGAAGGGATTGCATCTTTCAGCCCCAGTTTTAAACCGAAAT
CA
ATCCTCTGTTCTGATTCAGACAGTGAAGTGTTTCACCCCAGGATATGTGGTGTTGACAGAACACAATA
C
AGGGCTATTCGGATCTCTCCTCGGACTCACTTTCGCCCAATTTCTGCATCCGAACTGTCCCCAGGAGGA
GGA
AGCGAGTCAGAATTTGAATCTGAGAAAGATGAAGCAAATATTCCCATTCCTTCTCAAGTTGATATAT
TT
GAAGATCCGCAGGCAGATCTCAAACCTTTGGAAGAAGATGCAGAGAAAGAAGGCCATTACTATGGAAA
A
TCAGAGCTTGAGTCTGGAAAATTCCTTCCCAGGTTAAAAAAATCTGGGATGGAAAAGAGTGCTCAGACA
TCA
CTGGATTCCCAGGAGGAATCAACTGGGATTCTTTCAGTAGGAAAGCAAAATCAGTGTTTGGAATGTA
GC
ATGAATGAATCCCTGGAAATAGATTTAGAAAGCTCAGAAGCAAATTGTAAAATAATGGCACAATGCGA
G
GAAGAAATTAATAATTTTTGTGGTTGCAAAGCAGGTTGTCAGTTTCCTGCTTATGAAGATAATCCAGTT
TCT
TCGGGACAGCTGGAAGAGTTCCCTGTATTGAACACTGATATACAAGGAATGAATAGAAGTCAAGAAA
AA
CAGACCTGGTGGGAAAAAGCCTTGTACTCTCCTCTTTTTCCTGCATCAGAGTGTGAAGAATGTTACAC
A
AATGCCAAGGGAGAGAGTGGTTTAGAAGAATATCCAGATGCTAAAGAGACACCCAGTAATGAAGAGCGC
CTG
TTAGATTTTAATAGGGTGTCTTCTGTTTATGAAGCAAGATGTACAGGAGAGAGAGATTCTGGAGCAA
AG
TCAGATGGCTTCCGCGGAAAGATGTGCTCCAGCGCCAGCTCCACCTCGGAAGAGACAGGCTCAGAAGG
C
GGAGGCGAGTGGGTGGGCCCTAGTGAAGAGGAGCTCTTTTCTCGAACTCATCTCTAA


Translation (1395 aa):
MYPICTVVVDGLPSESSSSSYPGPVSVSEMSLLHALGPVQTWLGQELEKCGIDAMIYTRYVLSLLLHDSY
D
YDLQEQ
ENDIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSASDESSGIETLVEELCSRLKD
L
QSKQ
EEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCSYSSSSSSS
T
APPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPE
G
KIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGS
S
SSSSSGSVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKL
E
TTYRNRQDTSDLTSEAVEELSESVHGLCISNNNLHKTYLAAGTFIDGHFVEMPAVINEDIDLTGTSLCS
L
PEDNKYLDDIHLSELTHFYEVDIDQSMLDPGASETMQGESRILNMIRQKSKENTDFEAECCIVLDGMEL
Q
GERAIWTDSTSSVGAEGLFLQDLGNLAQFWECCSSSSGDADGESFGGDSPVRLSPILDSTVLNSHLLAG
N
QELFSDINEGSGINSCFSVFEVQCSNSVLPFSFETLNLGNENTDSSANMLGKTQSRLLIWTKNSAFEEN
E
HCSNLSTRTCSPWSHSEETRSDNETLNIQFEESTQFNAEDINYVVPRVSSNYVDEELLDFLQDETCQQN
S
RTLGEIPTLVFKKTSKLESVCGIQLEQKTENKNFETTQVCNESPHGDGYSSGVIKDIWTKMADTNSVAT
V
EIERTDAELFSADVNNYCCCLDAEAELETLQEPDKAVRRSEYHLWEGQKESLEKRAFASSELSNVDGGD
Y
TTPSKPWDVAQDKENTFILGGVYGELKTFNSDGEWAVVPPSHTKGSLLQCAASDVVTIAGTDVFMTPGN
S
FAPGHRQLWKPFVSFEQNDQPKSGENGLNKGFSFIFHEDLLGACGNFQVEDPGLEYSFSSFDLSNPFSQ
V
LHVECSFEPEGIASFSPSFKPKSILCSDSDSEVFHPRICGVDRTQYRAIRISPRTHFRPISASELSPGG
G
SESEFESEKDEANIPIPSQVDIFEDPQADLKPLEEDAEKEGHYYGKSELESGKFLPRLKKSGMEKSAQT
S
LDSQEESTGILSVGKQNQCLECSMNESLEIDLESSEANCKIMAQCEEEINNFCGCKAGCQFPAYEDNPV
S
SGQLEE
FPVLNTDIQGMNRSQEKQTWWEKALYSPLFPASECEECYTNAKGESGLEEYPDAKETPSNEER
L
LDFNR
VSSVYEARCTGERDSGAKSDGFRGKMCSSASSTSEETGSEGGGEWVGPSEEELFSRTHL



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser