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Report for CCDS91835.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91835.1 Public Homo sapiens 13 NAXD 24 110 108 CCDS HistoryNCBI Gene:55739Re-query CCDS DB by CCDS ID:91835.1Re-query CCDS DB by GeneID:55739See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91835.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000680254.1 ENSP00000505619.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000680254.1Link to Ensembl Protein Viewer:ENSP00000505619.1Re-query CCDS DB by Nucleotide ID:ENST00000680254Re-query CCDS DB by Protein ID:ENSP00000505619
Original member Current member NCBI NM_001242882.2 NP_001229811.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001242882.2Link to Protein Sequence:NP_001229811.1Re-query CCDS DB by Nucleotide ID:NM_001242882Re-query CCDS DB by Protein ID:NP_001229811Link to BLAST:NP_001229811.1

Chromosomal Locations for CCDS 91835.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 110615602 110615647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110622216 110622366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110624234 110624279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110625190 110625278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110627439 110627547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110634545 110634595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110634672 110634776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110635468 110635588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110637129 110637249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110638378 110638528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (990 nt):
ATGGCCCTGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGACGAGTTTTAGAAAGAGCGTTTTCGCTAC
GTAAAGCACATTCGATAAAGGATATGGAAAATACTTTGCAGCTGGTGAGAAATATCATACCTCCTCTGTC
TTCCACAAAGCACAAAGGGCAAGATGGAAGAATAGGCGTAGTTGGAGGCTGTCAGGAGTACACTGGAGCC
CCATATTTTGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACTTGTCCCACGTGTTCTGTGCCAGTGCGG
CCGCACCTGTGATTAAGGCCTACAGCCCGGAGCTGATCGTCCACCCAGTTCTTGACAGCCCCAATGCTGT
TCATGAGGTGGAGAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAGAGATGAT
GCGCTTCTCAGAAATGTCCAGGGCATTTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTGTCATCGACG
CGGATGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGAAGGCTGTGCTCACTCC
CAACCACGTGGAGTTCAGCAGACTGTATGACGCTGTGCTCAGAGGCCCTATGGACAGCGATGACAGCCAT
GGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCAGAAAGGAGAGCGCGACATCC
TCTCCAACGGCCAGCAGGTGCTTGTGTGCAGCCAGGAAGGCAGCAGCCGCAGGTGTGGAGGGCAAGGGGA
CCTCCTGTCGGGCTCCCTGGGCGTCCTGGTACACTGGGCGCTCCTTGCTGGACCACAGAAAACAAATGGG
TCCAGCCCTCTCCTGGTGGCCGCGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCC
AGAAGCACGGTCGCTCCACCACCACCTCCGACATGATCGCCGAGGTGGGGGCCGCCTTCAGCAAGCTCTT
TGAAACCTGA

Translation (329 aa):
MALGPRCGAIRACRRVLERAFSLRKAHSIKDMENTLQLVRNIIPPLSSTKHKGQDGRIGVVGGCQEYTGA
PYFAAISALKVGADLSHVFCASAAAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVGPGLGRDD
ALLRNVQGILEVSKARDIPVVIDADGLWLVAQQPALIHGYRKAVLTPNHVEFSRLYDAVLRGPMDSDDSH
GSVLRLSQALGNVTVVQKGERDILSNGQQVLVCSQEGSSRRCGGQGDLLSGSLGVLVHWALLAGPQKTNG
SSPLLVAAFGACSLTRQCNHQAFQKHGRSTTTSDMIAEVGAAFSKLFET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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