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Report for CCDS7514.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7514.1 Public Homo sapiens 10 DPCD 24 110 108 CCDS HistoryNCBI Gene:25911Re-query CCDS DB by CCDS ID:7514.1Re-query CCDS DB by GeneID:25911See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7514.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370151.9 ENSP00000359170.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370151.9Link to Ensembl Protein Viewer:ENSP00000359170.4Re-query CCDS DB by Nucleotide ID:ENST00000370151Re-query CCDS DB by Protein ID:ENSP00000359170
Original member Current member NCBI NM_015448.3 NP_056263.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015448.3Link to Protein Sequence:NP_056263.1Re-query CCDS DB by Nucleotide ID:NM_015448Re-query CCDS DB by Protein ID:NP_056263Link to BLAST:NP_056263.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056263.1 203 Q9BVM2 203 100% 0 0

Chromosomal Locations for CCDS 7514.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 101588337 101588400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101594658 101594738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101600738 101600862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101601203 101601336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101608835 101608937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101609367 101609471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (612 nt):
ATGGCGGTGACGGGCTGGTTGGAGAGTCTGCGGACAGCCCAGAAGACTGCGCTGCTGCAGGACGGGAGAA
GGAAGGTTCACTATTTATTCCCAGACGGCAAGGAAATGGCTGAAGAATATGACGAGAAGACGAGTGAACT
ACTTGTGAGAAAGTGGCGTGTGAAAAGTGCCCTGGGAGCCATGGGCCAGTGGCAGCTTGAAGTAGGAGAC
CCAGCGCCCCTAGGAGCAGGGAACCTGGGGCCTGAACTCATCAAGGAAAGCAATGCCAATCCTATCTTCA
TGCGCAAGGACACCAAGATGAGTTTCCAGTGGCGGATTCGAAACCTCCCCTATCCTAAGGATGTCTATAG
TGTCTCTGTGGACCAGAAGGAGCGCTGCATCATTGTCAGAACAACCAACAAGAAGTACTACAAGAAGTTC
TCCATTCCTGATCTAGATAGACACCAGCTACCTCTGGATGACGCCTTGCTGAGCTTTGCCCACGCCAACT
GCACCCTGATCATCTCTTACCAGAAGCCAAAGGAGGTTGTGGTGGCCGAGTCTGAGCTACAGAAGGAACT
AAAGAAGGTGAAGACAGCCCACAGCAACGATGGGGACTGCAAGACCCAGTAG

Translation (203 aa):
MAVTGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQWQLEVGD
PAPLGAGNLGPELIKESNANPIFMRKDTKMSFQWRIRNLPYPKDVYSVSVDQKERCIIVRTTNKKYYKKF
SIPDLDRHQLPLDDALLSFAHANCTLIISYQKPKEVVVAESELQKELKKVKTAHSNDGDCKTQ


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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