CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS71230.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
71230.1 |
Public |
Mus musculus |
3 |
Skil |
23 |
108 |
98 |
|
Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 71230.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000117728.7 |
ENSMUSP00000113054.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001271772.1 |
NP_001258701.1 |
Updated |
not alive |
|
|
|
NCBI |
NM_001271772.2 |
NP_001258701.1 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 71230.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1650 nt): ATGGAAAACCTCCAGTCTAAGTTCTCCTTAGTTCAGGGTTCAAATAAAAAGCTGAACGGCATGGAGGATG ATGGCAGTCCTCCTGTGAAAAAAATGATGACCGACATTCATGCCAATGGGAAAACCCTGACCAAGGTTCT TCCCGGCCCTCTTCTCATTCCTTCTGATAGCTCCACAGAGCTCACTCAGACTCTTTTGGAAGGGGAGTCT ATTTCTTGTTTTCAAGTTGGAGGAGAAAAGAGACTCTGTTTGCCCCAAGTCTTAAACTCTGTCCTCCGAG AATTTTCACTCCAGCAGATAAACACAGTATGTGATGAGCTGTACATCTATTGTTCAAGGTGTACTTCAGA CCAGCTTCATATCTTAAAGGTCTTAGGGATACTCCCATTTAATGCTCCATCCTGTGGGCTGATCACGTTG ACCGATGCACAAAGACTCTGTAATGCTTTACTGCGGCCACGAACTTTTCCTCAAAATGGTAGCATACTTC CTGCTAAAAGCTCTCTGGCCCAGTTGAAGGAAACTGGCAGTGCCTTTGAAGTGGAACATGAATGCTTGGG CAAATGTCAGGGTCTCTTTGCGCCTCAGTTTTATGTTCAGCCCGACGCTCCCTGTATCCAGTGCCTGGAG TGCTGTGGAATGTTTGCTCCCCAGACGTTCGTCATGCATTCGCACAGATCCCCTGACAAGAGAACTTGCC ATTGGGGCTTTGAGTCAGCCAAGTGGCACTGTTACCTTCATGTGAACCAAAAATACCTAGGGACACCCGA AGAAAAGAAACTGAAGATAATTTTAGAAGAAATGAAGGAGAAGTTTAGCATGAGAAATGGAAAGAGAATC CAATCAAAGACAGATACACCATCGGGAATGGAATTGCCATCATGGTATCCTGTTATAAAACAGGAAGGTG ACCATGTTCCCCAGACACATTCATTTTTACACCCCAGCTACTACCTGTACATGTGTGACAAAGTGGTTGC ACCGAATGTGTCGCTCACATCTGCTGCGTCCCAGTCTAAAGAGGCCACCAAGGCAGAGACAAATTCATCA ATCTCAAATAATTCTACAAGTAGAAAGAAATCTGAGTCTGCTGTGTGCAGCTTAGTGAGAGGCACAAGCA AGCGTGATTCAGAAGATTCCTCTCCACTTCTGGTCAGAGATGGTGAAGACGACAAGGGGAAGATCATGGA AGACGTGATGAGAACCTATGTAAGACAGCAGGAGAAGCTGAACTCCATTCTGCAGAGGAAGCAGCAGCTG CAGATGGAGGTGGAGATGCTGAGCAGTTCAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGAATCTAC AGAAAGAGCTTGAGTCGTTACAGAGTGAGCATGCTCAGAGGATGGAGGAATTCTATATTGAACAGAGAGA CTTAGAGAAAAAGCTGGAGCAGGTGATGCAGCAGAAATGCACCTGTGACTCAACCTTGGAGAAGGACAGG GAGGCCGAGTATGCGGCTCAGCTGGCAGAACTGAGGCAAAGACTAGACCATGCTGAGGCCGACAGGCAGG AACTCCAAGATGAACTCAGACAGGAGCGGGAGGCGAGACAGAAGCTGGAGATGATGATAAAGGAGCTGAA GCTGCAGATTGGCAAGTCGTCCAAGCCCTCCAAGGACTAA
Translation (549 aa): MENLQSKFSLVQGSNKKLNGMEDDGSPPVKKMMTDIHANGKTLTKVLPGPLLIPSDSSTELTQTLLEGES ISCFQVGGEKRLCLPQVLNSVLREFSLQQINTVCDELYIYCSRCTSDQLHILKVLGILPFNAPSCGLITL TDAQRLCNALLRPRTFPQNGSILPAKSSLAQLKETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLE CCGMFAPQTFVMHSHRSPDKRTCHWGFESAKWHCYLHVNQKYLGTPEEKKLKIILEEMKEKFSMRNGKRI QSKTDTPSGMELPSWYPVIKQEGDHVPQTHSFLHPSYYLYMCDKVVAPNVSLTSAASQSKEATKAETNSS ISNNSTSRKKSESAVCSLVRGTSKRDSEDSSPLLVRDGEDDKGKIMEDVMRTYVRQQEKLNSILQRKQQL QMEVEMLSSSKAMKELTEEQQNLQKELESLQSEHAQRMEEFYIEQRDLEKKLEQVMQQKCTCDSTLEKDR EAEYAAQLAELRQRLDHAEADRQELQDELRQEREARQKLEMMIKELKLQIGKSSKPSKD
|