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Report for CCDS50041.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
50041.1 |
Public |
Mus musculus |
17 |
Rab11fip3 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 50041.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000122103.8 |
ENSMUSP00000113521.1 |
Accepted |
alive |
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NCBI |
NM_001162869.2 |
NP_001156341.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001156341.1 |
1092 |
Q8CHD8-3 |
1092 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 50041.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3279 nt): ATGGAGCTGTGCCAGCCGACCTCCCTGTCAGACCACGACCAGCCAGCGTCTGGGCCCCAGCGTGGGGTCA TGGGGCTGGTGGGGCCCGACGCTCCTCGCGGCTGGTCAGAAGAGCCCGAGGAACACGCCCAGCTTCAACG GTGGCCAGAGGGACCCAACGCGCCAATCTGCTGGCCCGAGGAGGTAGAGGAGCCTCACGCTCCTAGTCGC TGGGCCAAAGAGCCCAATGCCCCTCGCTGCTCGTCCCAGGAGCCCGATGAATCCTGTCACTTGGCAGAGG AGCTGGAGGAATCCGACTCCCCTCGCTGCTGGCCCCAGGAGCCAGACACACCGTGCCACTTGGCCAAGGA GTTGGAGGAACCCGACGCCCCTCGCTGCCTGCCCCAGGAGCCCGACACACCGTGCTACTTGGCCAAAGAG CTAGAGGAACCCAACATCCCTCGGTGCTGGCCCCAGGAGCCCGACGTGCCGTGCCACTTGGCCAAGGAGC TAGAGGAACCCGACGCCCCTCGCTGCTGGCCCCAGGAACCAGACGCATTCTGTCACTTGCTCAAGGAGGT GGAGGAACCTGATGCCCTTCGCTGCTGGCTTCAAGGGCCAGACGCACCGTGCCACTTGGCCAAGGAACTG GAGGACCTCGACTCCCCTCGCTGCTGGCCCCAGGAGCCCGACGAATCCTGTCACTTGGCTAAGGAGCTGG AGGAACCAGACGCACCGTGCCACTTAGCCAAAGAGCTGGAGGAACCCGACGCCCCTCGCTGCTGGCCCCA GGAGCCCGACGTGCCCTGTCTCTTGGCCAAAAAGTGGGAGGAATCCGACGCACCGTGCCTCTTGACGGAG GAGCTGGAAGAGCCTGACGCCCTTCACTGCTGGCCCCAGGAGTCAGAGGCACCGTGTTTGTTGGCCAAGG AGCTAGAAGAGCCTGATGCCTCTCACAGCTGTCCTCAGGAGGCGGACACAGGGTGCCTCTCGGCCAAGGA GCCAGAGGAGCCTGATGTCTCTCACCTGTGGCAGGGGGTACCCGATGCACCGTGCCTCTTGGTCAAGGAA CCAGAGGAGGCCGATGCACTTCACTGTTGTTGGCCCGAGGAATCCGAGGAGCCGGATGCTCTCAACCCAC CGTGTTTCTGGGCCAATGAACCAGACGAGCCCGATCCATCACGATGTTGGTCAGAGGAGCCCCAGGTGCT GTGCCTCTGGCCGGAGGAGCAGAACACAAAGCGGTGCTGGCAGGAAGAGCCCGATGCACCCTGCTTCTGG CCCGAGGATCGAGAGGAACCCATAGTTTCGTGTCTTCAATTTAAAGAGCCAGAGAAGCCCAAAGTCCGGA GCAGTTGGCCTGAGGAGCTGGAAGACTGCTGCCCTACGCGGGGCCTACCCCTTGAGCCCTTGCTCGCCGA CGGCGAGCTGCTGCAGGCATGTCCCGGGCCACCCTCGGACCCAGGACCAGCGTTGTCGCTGCCCAGCGAG CCCGGGACAGCTCAGGAGGAGGGTGCACGCCTCAGGGCGGTATTTGACGCCCTGGACAGAGATGGGGACG GCTTCGTCCGCATCGAGGATTTCATCCAATTCGCCACGGTCTATGGGGCAGAGCAGGTGAAGGACTTAAC TCAGTACCTGGACCCGAGTGGGCTTGGCGTAATCAGCTTTGAAGATTTCTACCAAGGGATTGTAGCCATC AGAAATGGAGATCCTGATGGCCAGTTGTACAGCGTGGAGCCTGTCCAAGATGAAGAGACCCCTGCCTGTG CCGATGAGTTTGACGACTTTGTCACCTATGAGGCCAACGAGGTGACAGACAGTGCATATATGGGGTCTGA GAGCACCTACAGTGAGTGTGAGACCTTCACAGATGAGGACACCAGCACCCTGGTGCACCCCGAGCTGCAG CCTGAAGGGGACGTGGACAGTGCTGGTGGCTCAGGGGTGCCCTCTGAGTGCCTGGACACCATGGAGGAGC CTGACCATGGTGCATTGCTGCTGCTCCCAGGCAGATCCCGCCCCCACAGCCAAGCTGTCGTCATGGTGAT TGGCAGTGAGGAACATTTTGAAGATTATGGTGAGGGCAATGAGGCAGAACTATCCCCGGAGACCCTCTGC GATGGGGACGGCGAGGACCCTGCTTTTCTCACCCCCAGCTCCAACCCTCTTGCCTCAAAGCTGTGCGACG TCCTCACTGACGAGGCCTTTGAGTTTTACTGTAGCCAGTGCCATAAACAGATCAACCGCCTTGAGGATCT GTCTGCCCGCCTGACTGATCTTGAGATGAATAGCCCAGCCAAGCGGCTCTCCAGCAGGAAGGTGGCAAGG TATCTGCACCAGTCGGGGACCCTGACTATGGAGGCCCTGGAGGACCCTCCCCCAGAGCCTGTGGAGTGCC CAGAGGAGGACATTGCAGACAAGGTCATCTTCCTAGAGAGACGGGTGTCAGAGCTGGAGAAGGACAGTGC AGCTGCTGGCGAGCAGCATGGCAGGCTGAGGCAAGAAAACCTCCAGCTGGTGCACAGAGCCAATGCCTTG GAAGAGCAGCTGAAGGAACAGGAGTTCAGAGCCCAAGAGAAGGTCCTAGAAGAAACCAGGAAGCAGAAGG AACTTCTGTGCAAGATGGAGCGTGAGAAGAGCATTGAGATCGAGAACCTGCAGGCCAGGTTGCAGCAGCT GGATGAGGAGAACAGTGAGCTGCGGTCCTGCACACCCTGTCTGAAGGCCAACATCGAGCGCCTTGAGGAG GAGAAGCAGAAGATGCTGGATGAGATTGAGGAGTTGACACAGCGGCTCAGTGAGGAACAGGAGAATAAGA GGAAAATGGGGGACAGGCTGAGCCATGAGCGGCACCAATTCCAGAGAGACAAGGAAGCAACCCAGGAGCT GATCGAGGACCTCCGCAAGCAGCTAGAACATCTACAGCTCCTCAGACTGGAGGTGGAGCAGCGACGGGGC CGCAGCAGCAGCCTGGGCCTGCAGGAGTACAACAGCCGTGCACGGGAGAGCGAGCTGGAGCAGGAGGTCC GCAGACTCAAACAGGACAACCGTAACCTGAAGGAGCAAAATGATGAGCTAAATGGGCAGATCATCACCCT CAGCATCCAGGGTGCCAAGAGCCTCTTCTCCACGTCTTTCTCAGAATCACTGGCTGCAGAAATCAGCTCT GTCTCCCGAGATGAGCTCATGGAAGCAATCCAGAAGCAGGAGGAGATCAATTTCCGCCTGCAGGACTACA TTGACAGGATCATTGTGGCCATCCTGGAGACCAACCCATCCATCCTAGAGGTCAAGTAG
Translation (1092 aa): MELCQPTSLSDHDQPASGPQRGVMGLVGPDAPRGWSEEPEEHAQLQRWPEGPNAPICWPEEVEEPHAPSR WAKEPNAPRCSSQEPDESCHLAEELEESDSPRCWPQEPDTPCHLAKELEEPDAPRCLPQEPDTPCYLAKE LEEPNIPRCWPQEPDVPCHLAKELEEPDAPRCWPQEPDAFCHLLKEVEEPDALRCWLQGPDAPCHLAKEL EDLDSPRCWPQEPDESCHLAKELEEPDAPCHLAKELEEPDAPRCWPQEPDVPCLLAKKWEESDAPCLLTE ELEEPDALHCWPQESEAPCLLAKELEEPDASHSCPQEADTGCLSAKEPEEPDVSHLWQGVPDAPCLLVKE PEEADALHCCWPEESEEPDALNPPCFWANEPDEPDPSRCWSEEPQVLCLWPEEQNTKRCWQEEPDAPCFW PEDREEPIVSCLQFKEPEKPKVRSSWPEELEDCCPTRGLPLEPLLADGELLQACPGPPSDPGPALSLPSE PGTAQEEGARLRAVFDALDRDGDGFVRIEDFIQFATVYGAEQVKDLTQYLDPSGLGVISFEDFYQGIVAI RNGDPDGQLYSVEPVQDEETPACADEFDDFVTYEANEVTDSAYMGSESTYSECETFTDEDTSTLVHPELQ PEGDVDSAGGSGVPSECLDTMEEPDHGALLLLPGRSRPHSQAVVMVIGSEEHFEDYGEGNEAELSPETLC DGDGEDPAFLTPSSNPLASKLCDVLTDEAFEFYCSQCHKQINRLEDLSARLTDLEMNSPAKRLSSRKVAR YLHQSGTLTMEALEDPPPEPVECPEEDIADKVIFLERRVSELEKDSAAAGEQHGRLRQENLQLVHRANAL EEQLKEQEFRAQEKVLEETRKQKELLCKMEREKSIEIENLQARLQQLDEENSELRSCTPCLKANIERLEE EKQKMLDEIEELTQRLSEEQENKRKMGDRLSHERHQFQRDKEATQELIEDLRKQLEHLQLLRLEVEQRRG RSSSLGLQEYNSRARESELEQEVRRLKQDNRNLKEQNDELNGQIITLSIQGAKSLFSTSFSESLAAEISS VSRDELMEAIQKQEEINFRLQDYIDRIIVAILETNPSILEVK
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