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Report for CCDS35692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35692.1 Public Mus musculus 1 Gli2 23 108 98 CCDS HistoryNCBI Gene:14633Re-query CCDS DB by CCDS ID:35692.1Re-query CCDS DB by GeneID:14633See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35692.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062483.14 ENSMUSP00000054837.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062483.14Link to Ensembl Protein Viewer:ENSMUSP00000054837.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000062483Re-query CCDS DB by Protein ID:ENSMUSP00000054837
Original member Current member NCBI NM_001081125.1 NP_001074594.1 Accepted alive Link to Nucleotide Sequence:NM_001081125.1Link to Protein Sequence:NP_001074594.1Re-query CCDS DB by Nucleotide ID:NM_001081125Re-query CCDS DB by Protein ID:NP_001074594Link to BLAST:NP_001074594.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074594.1 1544 Q0VGT2 1544 100% 0 0

Chromosomal Locations for CCDS 35692.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 118835785 118838177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118840254 118840590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118841916 118842197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118844351 118844515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118845917 118846066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118848383 118848517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118853258 118853380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118854441 118854657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118855436 118855637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118866572 118866757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118867979 118868181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118890296 118890401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 119002040 119002175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4635 nt):
ATGGAGACTTCTGCCCCAGCCCCTGCACTGGAGAAGAAAGAAGCCAAGAGTGGTCTCTTGGAGGACAGCA
GC
TTCCCCGACCCAGGGAAAAAGGCCTGTCCTCTGGCGGTGGCCGCAGCTGTAGCCGCCCACGGAGTTCC
T
CAGCAGCTCCTGCCGGCTTTCCACGCGCCTTTGCCGATTGACATGAGACACCAGGAGGGAAGGTACCAT
TAT
GACCCTCACTCTGTCCACAGTGTACACGGGCCTCCCACCCTAAGTGGCAGCCCTGTCATCTCAGATA
TC
TCCTTGATACGACTTTCTCCACACCCTGCTGGCCCTGGAGAGTCACCCTTCAGCGCCCACCACCCCTA
C
GTGAACCCCCATATGGAGCACTACCTCCGGTCTGTGCACAGCAGCCCCACACTCTCAATGATCTCTGCC
GCC
AGGGGCCTCAGCCCTGCTGATGTGGCCCACGAACATCTGAAAGAGAGGGGACTCTTTAGCCTCGCAG
CC
CCAGGCACCAACCCTTCAGACTATTACCACCAGATGACCCTCATGGCAAGCCACCCCACCCCTTATGG
G
GACCTTCTAATGCAGAGCGGGGGTGCTGCTAGCGCACCCCATCTCCATGACTACCTCAACCCTGTGGAT
G
CA
TCACGATTCTCTAGTCCACGTGTGACCCCACGACTGAGCCGCAAGCGGGCTCTGTCCATCTCCCCGC
TC
TCAGATGCCAGCCTCGACCTACAACGCATGATTCGGACCTCTCCCAACTCGCTGGTAGCTTACATCAA
C
AACTCCAGGAGCAGCTCAGCAGCCAGTGGCTCTTATGGACATCTGTCTGCTGGTGCCCTCAGCCCAGCC
TTC
ACTTTTCCCCACCCCATCAATCCTGTGGCCTACCAGCAGATCCTGAGCCAGCAGCGGGGCCTGGGCT
CA
GCCTTTGGACACACACCACCCCTGATCCAGCCTTCACCCACCTTCTTGGCCCAGCAGCCCATGACTCT
C
ACCTCCATCAGCACCATGCCTACCCAACTCAGCAGCAGTAGCAGCAACTGTCTAAATGATGCCAACCAG
AAC
AAGCAGAACAGCGAGTCAGCTGTGAGCAGCACCGTGAACCCCATCACCATTCATAAGCGGAGCAAGG
TC
AAGACTGAGGCTGAGGGCCTGCGTCCAGCATCCCCGCTTGGACTGACACAGGAGCAGCTGGCCGATCT
C
AAGGAAGACCTGGACAGGGATGACTGTAAGCAGGAGGCCGAGGTGGTCATCTACGAGACCAACTGCCAC
TGG
GCAGACTGCACCAAGGAGTATGACACACAGGAGCAGCTGGTGCATCATATCAACAATGAACACATCC
AC
GGGGAGAAGAAGGAGTTCGTGTGCCGCTGGCAGGCCTGCACGAGAGAGCAGAAGCCCTTCAAGGCCCA
G
TACATGCTGGTTGTTCACATGCGCAGACACACGGGTGAGAAGCCACACAAGTGCACGTTCGAAGGCTGT
TCC
AAGGCCTACTCTCGCCTGGAGAACCTGAAGACACACCTGCGTTCACACACAGGAGAGAAGCCATATG
TG
TGTGAACACGAAGGCTGTAACAAAGCCTTCTCCAATGCCTCAGACCGCGCCAAGCACCAGAACCGCAC
T
CACTCCAATGAGAAACCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGGTACACAGACCCCAGCTCA
CTC
CGCAAGCATGTGAAGACTGTCCATGGGCCAGACGCCCATGTCACCAAGAAACAGCGTAATGATGTGC
AT
GTCCGTGCTCCACTGCTCAAGGAGAATGGGGATAATGAGGCCAGCGCCGAGCCAGGTGGCCGGGGACC
T
GAGGAGAGTGTGGAGGCCAGTAGCACCAGCCACACTGTGGAGGACTGCCTACATATCAAAGCCATCAAG
ACA
GAGAGCTCCGGGCTTTGTCAGTCCAGCCCCGGGGCCCAGTCATCCTGCAGCAGCGAGCCCTCTCCCC
TG
GGCAGTGCCCCCAACAATGACAGTGGCATGGAGATGCCGGGGACAGGGCCTGGGAGTCTGGGAGACCT
G
ACAGCACTGGCTGACACGTGTCCAGGAGCTGACACCTCAGCCCTGGCTGCACCCTCCACTGGTGGCCTG
CAG
CTGCGCAAACACATGAGCACCGTGCATCGCTTTGAGCAGCTGAAGAGAGAGAAGCTCAAGTCACTGA
AG
GATTCCTGCTCGTGGGCCGGCCCAGCTCCACACACCCGCAACACCAAGCTGCCTCCCCTTCCAGTCAA
T
GGTTCTGTCCTGGAAAACTTCAACAATACAGGGGGCGGTGGACCGGCAGGACTGCTGCCCAGCCAGCGG
CTA
CCAGAGCTGACCGAAGTGACGATGCTGAGCCAGCTGCAGGAACGAAGAGACAGCTCCACCAGCACCA
TG
AGCTCGGCCTACACTGTGAGCCGCCGCTCCTCTGGCATCTCCCCATACTTCTCTAGCCGTCGCTCCAG
C
GAGGCTTCGCCTCTCGGTGGCCTACGCCCGCACAACGCCAGCTCAGCAGACTCCTATGACCCCATCTCC
ACA
GATGCCTCTCGGCGCTCCAGTGAAGCCAGCCAGTGCAGTGGCGGTGGCCCAGGGCTGCTCAACCTCA
CA
CCTGCGCAGCAGTACAACCTGCGTGCCAAGTACGCAGCGGCCACAGGTGGACCACCGCCCACGCCACT
G
CCGGGCCTCGATCGTGTAAGCCTTCGTACCCGCCTGGCCTTGCTGGATGCTCCTGAGCGTGCACTTCCT
GGT
GCCTGCCCACATCCACTGGGGCCACGGCGTGGCAGCGATGGGCCTACCTATAGCCATGGTCATGGCC
AT
GGCTACGCAGGTGCGGCTCCAGCATTCCCCCACGAGGGGCCAAACAGCAGCACACGGCGGGCCAGCGA
C
CCTGTGCGGCGCCCTGACCCCCTTATTCTGCCTCGAGTGCAACGTTTCCACAGTACCCACAACATGAAT
CCA
GGTTCACTGCCACCCTGCGCTGATCGGCGTGGCCTGCACGTACAGAGCCACCCCAGCGTAGACAGCA
AC
CTGACCCGCAACGCCTACTCTCCCAGACCCCCTAGCATCAATGAGAACGTGGTGATGGAGGCCGTGGC
T
GCTGGGGTAGACGGCCCAGGGCTAGAGTGCGACCTGGGGCTGGTGGAGGATGAGCTGGTGCTGCCAGAT
GAT
GTGGTACAGTACATCAAGGCTCACACCGGTGGTACCTTGGATGACGGCATTCGGCAGGGGTATCCCA
CA
GAAGGTACTGGCTTCCCCGAGAACTCTAAGCTGCCCAGTCCTGGGCTACAAGGCCACCGCAGGCTAGC
A
GCTGCCGACTCCAACATGGGTCCTTCTGCTCCTGGACTCGGGGGCTGCCAGCTGAGCTACAGCCCCTCC
TCC
AACCTCAACAAGAGCAACATGCCTGTGCAGTGGAATGAGGTGAGTTCTGGCACCGTGGATGCCCTGC
CT
ACCCAGGTGAAGCCACCTCCTTTCCCTCACAGCAACCTGGCTGTGGTCCAACAGAAGCCAGCCTTTGG
C
CAGTATCCAGGATATAATCCACAATCCGTGCAGAGCAGCTCCGGAGGTCTAGACAGCACCCAGCCGCAC
CTA
CAGCTTCGAGGAGCCCCCTCTGCATCAAGAGGGAGCTACACGCAACAGCCTCGACAGCCAGCTGCAG
GC
AGTCAGTGCCTGGGTATGAGTGCGGCCATGAGCCCGCAGGCCAGCTACAGCCAAGCCCACCCCCAGCT
G
AGCCCAAACATTGTCAGCGGATCTCTGAACCAGTTTTCTCCCTCCTGCAGCAATATGGCAGCCAAGCCC
AGC
CACCTGGGACTCCCTCAGCAAATGGAAGTTGTCCCCAATGCCACCATCATGAATGGCCATCAACGGG
AG
CACGGGGTCCCCAATTCATCCCTGGCTGCGGTGTCACAACCTCACCCAGTCCTGAGCTATCCCCAGCA
G
GACAGCTACCAACAGGGCTCCAACCTTCTGTCATCCCATCAGCCTGGCTTCATGGAGTCCCAGCAGAAC
GCG
GGCTTTGGTCTCATGCAGCCTCGGCCACCCCTGGAACCCAACACGGCCAGCCGTCACCGTGGAGTAC
GT
TCTGGGCAACAGCAGTTGTATGCCAGGACCACTGGCCAAGCCATGGTCACATCAGCCAACCAAGAGAC
A
GCAGAAGCTATGCCCAAGGGACCAGCAGGGACCATGGTATCCCTAGCTCCTCAGCCATCTCAGGACACA
GGG
CGGGCACAAGATCAGAACACGCTATACTACTATGGCCAGATCCACATGTATGAACAGAATGGAGGCT
GC
CCAGCCGTGCAGCCCCAGCCGCCACAACCACAAGCTTGCTCAGACAGTATCCAGCCTGAGCCTTTGCC
T
TCACCGGGAGTCAACCAGGTGTCTAGCACCGTGGACTCCCAGCTCCTGGAGCCCCCCCAGATTGACTTT
GAT
GCCATCATGGATGATGGTGATCACTCGAGTTTGTTTTCTGGTGCACTGAGCCCAACCCTTCTCCACA
AT
CTCTCCCAGAATTCCTCACGCCTCACCACACCCCGGAATTCCTTGACACTGCCCTCCATCCCTGCGGG
C
ATCAGCAACATGGCCGTGGGCGACATGAGTTCCATGCTCACCAGCCTGGCTGAAGAGAGCAAGTTTTTA
AAC
ATGATGACCTAA


Translation (1544 aa):
METSAPAPALEKKEAKSGLLEDSSFPDPGKKACPLAVAAAVAAHGVPQQLLPAFHAPLPIDMRHQEGRYH
Y
DPHSVHSVH
GPPTLSGSPVISDISLIRLSPHPAGPGESPFSAHHPYVNPHMEHYLRSVHSSPTLSMISA
A
RGLSPAD
VAHEHLKERGLFSLAAPGTNPSDYYHQMTLMASHPTPYGDLLMQSGGAASAPHLHDYLNPVD
A
SRFSSPRVTPRLSRKRALSISPLSDASLDLQRMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGALSPA
F
TFPHPINPVAYQQILSQQRGLGSAFGHTPPLIQPSPTFLAQQPMTLTSISTMPTQLSSSSSNCLNDANQ

N
KQNSESAVSSTVNPITIHKRSKVKTEAEGLRPASPLGLTQ
EQLADLKEDLDRDDCKQEAEVVIYETNCH
W
ADCTKEYDTQEQLVH
HINNEHIHGEKKEFVCRWQACTREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGC
S
KAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNE
KPYICKIPGCTKRYTDPSS
L
RKHVKTVHGPDAHVTKKQRNDVHVRAPLLKENGDNEASAEPGGRGPEESVEASSTSHTVEDCLHIKAIK
T
ESSG
LCQSSPGAQSSCSSEPSPLGSAPNNDSGMEMPGTGPGSLGDLTALADTCPGADTSALAAPSTGGL
Q
LRKHMSTVHRFEQLKREKLKSLKDSCSWAGPAPHTRNTKLPPLPVN
GSVLENFNNTGGGGPAGLLPSQR
L
PELTEVTMLSQLQERRDSSTSTMSSAYTVSRRSSGISPYFSSRRSSEASPLGGLRPHNASSADSYDPIS
T
DASRRSSEASQCSGGGPGLLNLTPAQQYNLRAKYAAATGGPPPTPLPGLDRVSLRTRLALLDAPERALP
G
ACPHPLGPRRGSDGPTYSHGHGHGYAGAAPAFPHEGPNSSTRRASDPVRRPDPLILPRVQRFHSTHNMN
P
GSLPPCADRRGLHVQSHPSVDSNLTRNAYSPRPPSINENVVMEAVAAGVDGPGLECDLGLVEDELVLPD
D
VVQYIKAHTGGTLDDGIRQGYPTEGTGFPENSKLPSPGLQGHRRLAAADSNMGPSAPGLGGCQLSYSPS
S
NLNKSNMPVQWNEVSSGTVDALPTQVKPPPFPHSNLAVVQQKPAFGQYPGYNPQSVQSSSGGLDSTQPH
L
QLRGAPSASRGSYTQQPRQPAAGSQCLGMSAAMSPQASYSQAHPQLSPNIVSGSLNQFSPSCSNMAAKP
S
HLGLPQQMEVVPNATIMNGHQREHGVPNSSLAAVSQPHPVLSYPQQDSYQQGSNLLSSHQPGFMESQQN
A
GFGLMQPRPPLEPNTASRHRGVRSGQQQLYARTTGQAMVTSANQETAEAMPKGPAGTMVSLAPQPSQDT
G
RAQDQNTLYYYGQIHMYEQNGGCPAVQPQPPQPQACSDSIQPEPLPSPGVNQVSSTVDSQLLEPPQIDF
D
AIMDDGDHSSLFSGALSPTLLHNLSQNSSRLTTPRNSLTLPSIPAGISNMAVGDMSSMLTSLAEESKFL
N
MMT




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser