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Report for CCDS35666.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35666.1 Public Mus musculus 1 Asb1 23 108 98 CCDS HistoryNCBI Gene:65247Re-query CCDS DB by CCDS ID:35666.1Re-query CCDS DB by GeneID:65247See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35666.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000188879.1 ENSMUSP00000140731.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000188879.1Link to Ensembl Protein Viewer:ENSMUSP00000140731.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000188879Re-query CCDS DB by Protein ID:ENSMUSP00000140731
Original member Current member NCBI NM_023046.4 NP_075533.3 Accepted alive Link to Nucleotide Sequence:NM_023046.4Link to Protein Sequence:NP_075533.3Re-query CCDS DB by Nucleotide ID:NM_023046Re-query CCDS DB by Protein ID:NP_075533Link to BLAST:NP_075533.3

Chromosomal Locations for CCDS 35666.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 91541153 91541175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91544151 91544297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91546928 91547230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91552054 91552439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91554751 91554878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGGGGTTCGGATCTTCTTCCAGTGCAGGTCCTAATCTGAAGGAGTGGCTGAGGGAGCAGTTCTGTGACC
ATCCACTGGAGCACTGTGACGATACAAGACTCCATGATGCAGCCTATGTAGGGGACCTCCAGACCCTCAG
GAACCTACTGCAAGAGGAGAGCTACCGGAGCCGCATCAATGAGAAGTCTGTCTGGTGCTGCGGCTGGCTT
CCCTGCACACCACTGAGGATCGCAGCCACTGCAGGCCATGGGAACTGTGTGGACTTCCTCATACGCAAAG
GGGCCGAGGTGGACCTGGTGGATGTCAAGGGGCAGACTGCCCTGTATGTGGCTGTAGTGAACGGGCACTT
GGAGAGCACTGAGATCCTTTTGGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACCACCGCAGCACTCCT
GTGTACCATGCCTCTCGTGTGGGTAGGGACGACATCCTGAAGGCTCTTATCAGGTATGGGGCAGATGTTG
ATGTCAACCATCATCTGACTCCTGACACCCGGCCCCCTTTTTCACGGCGGCTAACCTCCTTGGTGGTCTG
TCCTCTATACATCAGTGCTGCCTACCATAACCTTCAGTGCTTCAGGCTGCTCTTGCAGGCTGGGGCAAAT
CCTGACTTCAATTGCAATGGCCCTGTCAACACCCAGGAGTTCTACAGGGGATCCCCTGGGTGTGTCATGG
ATGCTGTCCTGCGCCATGGCTGTGAAGCAGCCTTCGTGAGTCTGTTGGTAGAGTTTGGAGCCAACCTGAA
CCTGGTGAAGTGGGAATCCCTGGGCCCAGAGGCAAGAGGCAGAAGAAAGATGGATCCTGAGGCCTTGCAG
GTCTTTAAAGAGGCCAGAAGTATTCCCAGGACCTTGCTGAGTTTGTGCCGGGTGGCTGTGAGAAGAGCTC
TTGGCAAATACCGACTGCATCTGGTTCCCTCGCTGCCGCTGCCAGACCCCATAAAGAAGTTTTTGCTTTA
TGAGTAG

Translation (328 aa):
MGFGSSSSAGPNLKEWLREQFCDHPLEHCDDTRLHDAAYVGDLQTLRNLLQEESYRSRINEKSVWCCGWL
PCTPLRIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLESTEILLEAGADPNGSRHHRSTP
VYHASRVGRDDILKALIRYGADVDVNHHLTPDTRPPFSRRLTSLVVCPLYISAAYHNLQCFRLLLQAGAN
PDFNCNGPVNTQEFYRGSPGCVMDAVLRHGCEAAFVSLLVEFGANLNLVKWESLGPEARGRRKMDPEALQ
VFKEARSIPRTLLSLCRVAVRRALGKYRLHLVPSLPLPDPIKKFLLYE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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