NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS35692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35692.1 Public Mus musculus 1 Gli2 23 108 98 CCDS HistoryNCBI Gene:14633Re-query CCDS DB by CCDS ID:35692.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35692.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062483.14 ENSMUSP00000054837.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062483.14Link to Ensembl Protein Viewer:ENSMUSP00000054837.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000062483Re-query CCDS DB by Protein ID:ENSMUSP00000054837
Original member Current member NCBI NM_001081125.1 NP_001074594.1 Accepted alive Link to Nucleotide Sequence:NM_001081125.1Link to Protein Sequence:NP_001074594.1Re-query CCDS DB by Nucleotide ID:NM_001081125Re-query CCDS DB by Protein ID:NP_001074594Link to BLAST:NP_001074594.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074594.1 1544 Q0VGT2 1544 100% 0 0

Chromosomal Locations for CCDS 35692.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 118835785 118838177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118840254 118840590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118841916 118842197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118844351 118844515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118845917 118846066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118848383 118848517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118853258 118853380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118854441 118854657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118855436 118855637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118866572 118866757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118867979 118868181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 118890296 118890401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 119002040 119002175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4635 nt):
ATGGAGACTTCTGCCCCAGCCCCTGCACTGGAGAAGAAAGAAGCCAAGAGTGGTCTCTTGGAGGACAGCA
GCTTCCCCGACCCAGGGAAAAAGGCCTGTCCTCTGGCGGTGGCCGCAGCTGTAGCCGCCCACGGAGTTCC
TCAGCAGCTCCTGCCGGCTTTCCACGCGCCTTTGCCGATTGACATGAGACACCAGGAGGGAAGGTACCAT
TATGACCCTCACTCTGTCCACAGTGTACACGGGCCTCCCACCCTAAGTGGCAGCCCTGTCATCTCAGATA
TCTCCTTGATACGACTTTCTCCACACCCTGCTGGCCCTGGAGAGTCACCCTTCAGCGCCCACCACCCCTA
CGTGAACCCCCATATGGAGCACTACCTCCGGTCTGTGCACAGCAGCCCCACACTCTCAATGATCTCTGCC
GCCAGGGGCCTCAGCCCTGCTGATGTGGCCCACGAACATCTGAAAGAGAGGGGACTCTTTAGCCTCGCAG
CCCCAGGCACCAACCCTTCAGACTATTACCACCAGATGACCCTCATGGCAAGCCACCCCACCCCTTATGG
GGACCTTCTAATGCAGAGCGGGGGTGCTGCTAGCGCACCCCATCTCCATGACTACCTCAACCCTGTGGAT
GCATCACGATTCTCTAGTCCACGTGTGACCCCACGACTGAGCCGCAAGCGGGCTCTGTCCATCTCCCCGC
TCTCAGATGCCAGCCTCGACCTACAACGCATGATTCGGACCTCTCCCAACTCGCTGGTAGCTTACATCAA
CAACTCCAGGAGCAGCTCAGCAGCCAGTGGCTCTTATGGACATCTGTCTGCTGGTGCCCTCAGCCCAGCC
TTCACTTTTCCCCACCCCATCAATCCTGTGGCCTACCAGCAGATCCTGAGCCAGCAGCGGGGCCTGGGCT
CAGCCTTTGGACACACACCACCCCTGATCCAGCCTTCACCCACCTTCTTGGCCCAGCAGCCCATGACTCT
CACCTCCATCAGCACCATGCCTACCCAACTCAGCAGCAGTAGCAGCAACTGTCTAAATGATGCCAACCAG
AACAAGCAGAACAGCGAGTCAGCTGTGAGCAGCACCGTGAACCCCATCACCATTCATAAGCGGAGCAAGG
TCAAGACTGAGGCTGAGGGCCTGCGTCCAGCATCCCCGCTTGGACTGACACAGGAGCAGCTGGCCGATCT
CAAGGAAGACCTGGACAGGGATGACTGTAAGCAGGAGGCCGAGGTGGTCATCTACGAGACCAACTGCCAC
TGGGCAGACTGCACCAAGGAGTATGACACACAGGAGCAGCTGGTGCATCATATCAACAATGAACACATCC
ACGGGGAGAAGAAGGAGTTCGTGTGCCGCTGGCAGGCCTGCACGAGAGAGCAGAAGCCCTTCAAGGCCCA
GTACATGCTGGTTGTTCACATGCGCAGACACACGGGTGAGAAGCCACACAAGTGCACGTTCGAAGGCTGT
TCCAAGGCCTACTCTCGCCTGGAGAACCTGAAGACACACCTGCGTTCACACACAGGAGAGAAGCCATATG
TGTGTGAACACGAAGGCTGTAACAAAGCCTTCTCCAATGCCTCAGACCGCGCCAAGCACCAGAACCGCAC
TCACTCCAATGAGAAACCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGGTACACAGACCCCAGCTCA
CTCCGCAAGCATGTGAAGACTGTCCATGGGCCAGACGCCCATGTCACCAAGAAACAGCGTAATGATGTGC
ATGTCCGTGCTCCACTGCTCAAGGAGAATGGGGATAATGAGGCCAGCGCCGAGCCAGGTGGCCGGGGACC
TGAGGAGAGTGTGGAGGCCAGTAGCACCAGCCACACTGTGGAGGACTGCCTACATATCAAAGCCATCAAG
ACAGAGAGCTCCGGGCTTTGTCAGTCCAGCCCCGGGGCCCAGTCATCCTGCAGCAGCGAGCCCTCTCCCC
TGGGCAGTGCCCCCAACAATGACAGTGGCATGGAGATGCCGGGGACAGGGCCTGGGAGTCTGGGAGACCT
GACAGCACTGGCTGACACGTGTCCAGGAGCTGACACCTCAGCCCTGGCTGCACCCTCCACTGGTGGCCTG
CAGCTGCGCAAACACATGAGCACCGTGCATCGCTTTGAGCAGCTGAAGAGAGAGAAGCTCAAGTCACTGA
AGGATTCCTGCTCGTGGGCCGGCCCAGCTCCACACACCCGCAACACCAAGCTGCCTCCCCTTCCAGTCAA
TGGTTCTGTCCTGGAAAACTTCAACAATACAGGGGGCGGTGGACCGGCAGGACTGCTGCCCAGCCAGCGG
CTACCAGAGCTGACCGAAGTGACGATGCTGAGCCAGCTGCAGGAACGAAGAGACAGCTCCACCAGCACCA
TGAGCTCGGCCTACACTGTGAGCCGCCGCTCCTCTGGCATCTCCCCATACTTCTCTAGCCGTCGCTCCAG
CGAGGCTTCGCCTCTCGGTGGCCTACGCCCGCACAACGCCAGCTCAGCAGACTCCTATGACCCCATCTCC
ACAGATGCCTCTCGGCGCTCCAGTGAAGCCAGCCAGTGCAGTGGCGGTGGCCCAGGGCTGCTCAACCTCA
CACCTGCGCAGCAGTACAACCTGCGTGCCAAGTACGCAGCGGCCACAGGTGGACCACCGCCCACGCCACT
GCCGGGCCTCGATCGTGTAAGCCTTCGTACCCGCCTGGCCTTGCTGGATGCTCCTGAGCGTGCACTTCCT
GGTGCCTGCCCACATCCACTGGGGCCACGGCGTGGCAGCGATGGGCCTACCTATAGCCATGGTCATGGCC
ATGGCTACGCAGGTGCGGCTCCAGCATTCCCCCACGAGGGGCCAAACAGCAGCACACGGCGGGCCAGCGA
CCCTGTGCGGCGCCCTGACCCCCTTATTCTGCCTCGAGTGCAACGTTTCCACAGTACCCACAACATGAAT
CCAGGTTCACTGCCACCCTGCGCTGATCGGCGTGGCCTGCACGTACAGAGCCACCCCAGCGTAGACAGCA
ACCTGACCCGCAACGCCTACTCTCCCAGACCCCCTAGCATCAATGAGAACGTGGTGATGGAGGCCGTGGC
TGCTGGGGTAGACGGCCCAGGGCTAGAGTGCGACCTGGGGCTGGTGGAGGATGAGCTGGTGCTGCCAGAT
GATGTGGTACAGTACATCAAGGCTCACACCGGTGGTACCTTGGATGACGGCATTCGGCAGGGGTATCCCA
CAGAAGGTACTGGCTTCCCCGAGAACTCTAAGCTGCCCAGTCCTGGGCTACAAGGCCACCGCAGGCTAGC
AGCTGCCGACTCCAACATGGGTCCTTCTGCTCCTGGACTCGGGGGCTGCCAGCTGAGCTACAGCCCCTCC
TCCAACCTCAACAAGAGCAACATGCCTGTGCAGTGGAATGAGGTGAGTTCTGGCACCGTGGATGCCCTGC
CTACCCAGGTGAAGCCACCTCCTTTCCCTCACAGCAACCTGGCTGTGGTCCAACAGAAGCCAGCCTTTGG
CCAGTATCCAGGATATAATCCACAATCCGTGCAGAGCAGCTCCGGAGGTCTAGACAGCACCCAGCCGCAC
CTACAGCTTCGAGGAGCCCCCTCTGCATCAAGAGGGAGCTACACGCAACAGCCTCGACAGCCAGCTGCAG
GCAGTCAGTGCCTGGGTATGAGTGCGGCCATGAGCCCGCAGGCCAGCTACAGCCAAGCCCACCCCCAGCT
GAGCCCAAACATTGTCAGCGGATCTCTGAACCAGTTTTCTCCCTCCTGCAGCAATATGGCAGCCAAGCCC
AGCCACCTGGGACTCCCTCAGCAAATGGAAGTTGTCCCCAATGCCACCATCATGAATGGCCATCAACGGG
AGCACGGGGTCCCCAATTCATCCCTGGCTGCGGTGTCACAACCTCACCCAGTCCTGAGCTATCCCCAGCA
GGACAGCTACCAACAGGGCTCCAACCTTCTGTCATCCCATCAGCCTGGCTTCATGGAGTCCCAGCAGAAC
GCGGGCTTTGGTCTCATGCAGCCTCGGCCACCCCTGGAACCCAACACGGCCAGCCGTCACCGTGGAGTAC
GTTCTGGGCAACAGCAGTTGTATGCCAGGACCACTGGCCAAGCCATGGTCACATCAGCCAACCAAGAGAC
AGCAGAAGCTATGCCCAAGGGACCAGCAGGGACCATGGTATCCCTAGCTCCTCAGCCATCTCAGGACACA
GGGCGGGCACAAGATCAGAACACGCTATACTACTATGGCCAGATCCACATGTATGAACAGAATGGAGGCT
GCCCAGCCGTGCAGCCCCAGCCGCCACAACCACAAGCTTGCTCAGACAGTATCCAGCCTGAGCCTTTGCC
TTCACCGGGAGTCAACCAGGTGTCTAGCACCGTGGACTCCCAGCTCCTGGAGCCCCCCCAGATTGACTTT
GATGCCATCATGGATGATGGTGATCACTCGAGTTTGTTTTCTGGTGCACTGAGCCCAACCCTTCTCCACA
ATCTCTCCCAGAATTCCTCACGCCTCACCACACCCCGGAATTCCTTGACACTGCCCTCCATCCCTGCGGG
CATCAGCAACATGGCCGTGGGCGACATGAGTTCCATGCTCACCAGCCTGGCTGAAGAGAGCAAGTTTTTA
AACATGATGACCTAA

Translation (1544 aa):
METSAPAPALEKKEAKSGLLEDSSFPDPGKKACPLAVAAAVAAHGVPQQLLPAFHAPLPIDMRHQEGRYH
YDPHSVHSVHGPPTLSGSPVISDISLIRLSPHPAGPGESPFSAHHPYVNPHMEHYLRSVHSSPTLSMISA
ARGLSPADVAHEHLKERGLFSLAAPGTNPSDYYHQMTLMASHPTPYGDLLMQSGGAASAPHLHDYLNPVD
ASRFSSPRVTPRLSRKRALSISPLSDASLDLQRMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGALSPA
FTFPHPINPVAYQQILSQQRGLGSAFGHTPPLIQPSPTFLAQQPMTLTSISTMPTQLSSSSSNCLNDANQ
NKQNSESAVSSTVNPITIHKRSKVKTEAEGLRPASPLGLTQEQLADLKEDLDRDDCKQEAEVVIYETNCH
WADCTKEYDTQEQLVHHINNEHIHGEKKEFVCRWQACTREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGC
SKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPSS
LRKHVKTVHGPDAHVTKKQRNDVHVRAPLLKENGDNEASAEPGGRGPEESVEASSTSHTVEDCLHIKAIK
TESSGLCQSSPGAQSSCSSEPSPLGSAPNNDSGMEMPGTGPGSLGDLTALADTCPGADTSALAAPSTGGL
QLRKHMSTVHRFEQLKREKLKSLKDSCSWAGPAPHTRNTKLPPLPVNGSVLENFNNTGGGGPAGLLPSQR
LPELTEVTMLSQLQERRDSSTSTMSSAYTVSRRSSGISPYFSSRRSSEASPLGGLRPHNASSADSYDPIS
TDASRRSSEASQCSGGGPGLLNLTPAQQYNLRAKYAAATGGPPPTPLPGLDRVSLRTRLALLDAPERALP
GACPHPLGPRRGSDGPTYSHGHGHGYAGAAPAFPHEGPNSSTRRASDPVRRPDPLILPRVQRFHSTHNMN
PGSLPPCADRRGLHVQSHPSVDSNLTRNAYSPRPPSINENVVMEAVAAGVDGPGLECDLGLVEDELVLPD
DVVQYIKAHTGGTLDDGIRQGYPTEGTGFPENSKLPSPGLQGHRRLAAADSNMGPSAPGLGGCQLSYSPS
SNLNKSNMPVQWNEVSSGTVDALPTQVKPPPFPHSNLAVVQQKPAFGQYPGYNPQSVQSSSGGLDSTQPH
LQLRGAPSASRGSYTQQPRQPAAGSQCLGMSAAMSPQASYSQAHPQLSPNIVSGSLNQFSPSCSNMAAKP
SHLGLPQQMEVVPNATIMNGHQREHGVPNSSLAAVSQPHPVLSYPQQDSYQQGSNLLSSHQPGFMESQQN
AGFGLMQPRPPLEPNTASRHRGVRSGQQQLYARTTGQAMVTSANQETAEAMPKGPAGTMVSLAPQPSQDT
GRAQDQNTLYYYGQIHMYEQNGGCPAVQPQPPQPQACSDSIQPEPLPSPGVNQVSSTVDSQLLEPPQIDF
DAIMDDGDHSSLFSGALSPTLLHNLSQNSSRLTTPRNSLTLPSIPAGISNMAVGDMSSMLTSLAEESKFL
NMMT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH