NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE189861 Query DataSets for GSE189861
Status Public on Nov 30, 2021
Title Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34767259
Submission date Nov 30, 2021
Last update date Dec 03, 2021
Contact name Marco A Marra
E-mail(s) mmarra@bcgsc.ca
Organization name Canada's Michael Smith Genome Sciences Centre
Street address 675 W 10th Ave, 7th Floor
City Vancouver
State/province BC
ZIP/Postal code V5Z 1L3
Country Canada
 
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (116)
GSM5708635 CIC-WT (IDH1-WT) Input DNA rep 1
GSM5708636 CIC-WT (IDH1-WT) Input DNA rep 2
GSM5708637 CIC-KO1 (IDH1-WT) Input DNA rep 1
This SuperSeries is composed of the following SubSeries:
GSE189857 Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells [histone_chip]
GSE189858 Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells [cic_chip]
GSE189859 Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells [RNA-seq]
Relations
BioProject PRJNA784798

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE189861_RAW.tar 2.9 Gb (http)(custom) TAR (of BED, NARROWPEAK, TSV)
SRA Run SelectorHelp

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap