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Series GSE179840 Query DataSets for GSE179840
Status Public on Sep 15, 2021
Title Gene expression profiles of splenic pDCs in C57Bl6/J and Siglec-H deficient mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The steady-state gene expression of pDCs of two different mouse strains was analyzed. Splenic plasmacytoid dendritic cells (pDCs) of Siglec-H knock-out mice on C57Bl& background and the Siglec-H expression littermates (+/+) were enriched and sorted by FACS before generating RNA, followed by cDNA generation and sequencing.
 
Overall design There are 11 samples in total. Five replicate for the Siglec-H +/+ and six for the Siglec-H -/- condition.
 
Contributor(s) Nitschke L
Citation(s) 34497606
Submission date Jul 09, 2021
Last update date Sep 15, 2021
Contact name Lars Nitschke
E-mail(s) Lars.Nitschke@fau.de
Organization name Friedrich-Alexander-University Erlangen-Nürnberg
Department Biology
Lab Professur für Genetik - Prof. Lars Nitschke
Street address Staudtstr. 5
City Erlangen
State/province Bavaria
ZIP/Postal code 91058
Country Germany
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (11)
GSM5434977 DD38 (wt1)
GSM5434978 DD39 (wt5)
GSM5434979 DD40 (wt6)
Relations
BioProject PRJNA745203
SRA SRP327681

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179840_UnnormalizedFeatureCounts.txt.gz 4.6 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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