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Series GSE164953 Query DataSets for GSE164953
Status Public on Dec 01, 2021
Title circRNA-sequencing analysis of plasma exosomes in hepatocellular carcinoma
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Hepatocellular carcinoma (HCC) is currently the third leading cause of death worldwide and the most common type of primary liver cancer, finding noninvasive biomarkers for HCC diagnostic and prognostic are very urging. Previous genomic studies mainly focus on finding miRNA biomarkers for HCC. In this study, we focus on finding circRNA fragments suitable for serving as hcc biomarkers with plasma exosomal RNA-seq..
 
Overall design RNA-seq of plasma exosomal RNA collected from HCC patients, healthy donors, each with 6 replicates
 
Contributor(s) Zhai X, Jin B
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 16, 2021
Last update date Dec 01, 2021
Contact name Xiangyu Zhai
E-mail(s) xiangyuzhai@126.com
Phone +8615098772066
Organization name Qilu hospital of Shandong University
Street address Department of general surgery, Qilu hospital of Shandong University´╝îWenhuaxi Road
City Ji Nan
State/province China
ZIP/Postal code 250000
Country China
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (12)
GSM5023727 Hepatocellular carcinoma1
GSM5023728 Hepatocellular carcinoma2
GSM5023729 Hepatocellular carcinoma3
Relations
BioProject PRJNA692609
SRA SRP302037

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164953_CircRNA_Expression_Profiling.xlsx 3.6 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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