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Platform GPL26699 Query DataSets for GPL26699
Status Public on May 22, 2019
Title Illumina Human Exome Fine BeadChip (Exome_Fine_30K_ExomePlus_15031625_B)
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina Inc.
Manufacture protocol see manufacturer's website
 
Description Descriptor File Name: Exome_Fine_30K_ExomePlus_15031625_B.csv
 
Submission date May 22, 2019
Last update date Jun 17, 2019
Contact name GEO admin
E-mail(s) geo@ncbi.nlm.nih.gov
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (12398) GSM3801086, GSM3801087, GSM3801088, GSM3801089, GSM3801090, GSM3801091 
Series (1)
GSE131670 Exome-wide rare loss-of-function variant enrichment study in 21,347 Han Chinese individuals identifies four new susceptibility genes for psoriasis [healthy controls]

Data table header descriptions
ID
IlmnID
SPOT_ID
IlmnStrand
SNP
AddressA_ID
AlleleA_ProbeSeq
AddressB_ID
AlleleB_ProbeSeq
GenomeBuild
Chr
MapInfo
Ploidy
Species
Source
SourceVersion
SourceStrand
SourceSeq
TopGenomicSeq
BeadSetID

Data table
ID IlmnID SPOT_ID IlmnStrand SNP AddressA_ID AlleleA_ProbeSeq AddressB_ID AlleleB_ProbeSeq GenomeBuild Chr MapInfo Ploidy Species Source SourceVersion SourceStrand SourceSeq TopGenomicSeq BeadSetID
exm-IND1-200449980 exm-IND1-200449980-0_M_R_1990486447 exm-IND1-200449980 MINUS [D/I] 91721246 CTGTGGAACTTTCCGGAGCTCGGCACCCTTCCCCCAAGCCTACCTGGGCG 37.1 1 202183358 diploid Homo sapiens 1000genomes 0 PLUS GAGGGCCGCTCAGCGAGGGCGGGACAGAACCTCTCCCGGGCTGGGAGTGCACGGCGCGGT[-/G]CGCCCAGGTAGGCTTGGGGGAAGGGTGCCGAGCTCCGGAAAGTTCCACAGGTCCTCCGCA GAGGGCCGCTCAGCGAGGGCGGGACAGAACCTCTCCCGGGCTGGGAGTGCACGGCGCGGT[-/G]CGCCCAGGTAGGCTTGGGGGAAGGGTGCCGAGCTCCGGAAAGTTCCACAGGTCCTCCGCA 621
exm-IND1-201453487 exm-IND1-201453487-0_M_R_1990486448 exm-IND1-201453487 MINUS [D/I] 40777952 TCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACT 37.1 1 203186865 diploid Homo sapiens 1000genomes 0 PLUS CATGGAGCTGTGTTTGTACCCCACCTCCAAATTCCACCACTGGCCCTGGGCCCCTTACTT[-/ACTC]AGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTGGTTGCAGGAGAAGCCGGCA CATGGAGCTGTGTTTGTACCCCACCTCCAAATTCCACCACTGGCCCTGGGCCCCTTACTT[-/ACTC]AGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTGGTTGCAGGAGAAGCCGGCA 621
exm-IND1-85310248 exm-IND1-85310248-0_P_F_1990486624 exm-IND1-85310248 PLUS [I/D] 9776533 TCAGAACCATGGCTCCAAAACAAAAGAAAAAGACATCACGTGGCAAAAAA 37.1 1 85537661 diploid Homo sapiens 1000genomes 0 PLUS CTTTATGCAGCCCAAGTCAGAACCATGGCTCCAAAACAAAAGAAAAAGACATCACGTGGC[-/A]AAAAAAGACTAAAACCAGTATTAGCTGGTAGGAATATTTCTTCATTGAATGGGATTTTTT CTTTATGCAGCCCAAGTCAGAACCATGGCTCCAAAACAAAAGAAAAAGACATCACGTGGC[-/A]AAAAAAGACTAAAACCAGTATTAGCTGGTAGGAATATTTCTTCATTGAATGGGATTTTTT 621
exm-IND10-102817747 exm-IND10-102817747-0_P_F_1990486569 exm-IND10-102817747 PLUS [I/D] 86738218 CTCTGCAAGTTTTGTGCCTTAGCGGAAAGAGGCGACATCTCTGGCAAGTT 37.1 10 102827758 diploid Homo sapiens 1000genomes 0 PLUS GGGAACACCTGGCTCTGCAAGTTTTGTGCCTTAGCGGAAAGAGGCGACATCTCTGGCAAG[-/T]TTGGGAGTACAGGAAGTAGCGAAGGAGTGCCATCTGGTGGATCCTTCTGGTAGTGACACT GGGAACACCTGGCTCTGCAAGTTTTGTGCCTTAGCGGAAAGAGGCGACATCTCTGGCAAG[-/T]TTGGGAGTACAGGAAGTAGCGAAGGAGTGCCATCTGGTGGATCCTTCTGGTAGTGACACT 621
exm-IND10-18329639 exm-IND10-18329639-0_M_R_1990486442 exm-IND10-18329639 MINUS [D/I] 71737939 AAGGCTGCTCCTATGGCTAGGCCATCTGCAAAATTATGCAGGCTGTCCCC 37.1 10 18289634 diploid Homo sapiens 1000genomes 0 PLUS CTGTGTTTATTTGGTTCCTTAGGTAAAGCCATTAGCTTGTTAGCAATCATGATTCTGGTT[-/G]GGGGACAGCCTGCATAATTTTGCAGATGGCCTAGCCATAGGAGCAGCCTTCTCATCATCA CTGTGTTTATTTGGTTCCTTAGGTAAAGCCATTAGCTTGTTAGCAATCATGATTCTGGTT[-/G]GGGGACAGCCTGCATAATTTTGCAGATGGCCTAGCCATAGGAGCAGCCTTCTCATCATCA 621
exm-IND10-27476467 exm-IND10-27476467-0_M_R_1990486443 exm-IND10-27476467 MINUS [D/I] 82710322 ATGGAGCCAGCAAAAAGGATGAAGAAGAGCTTGGACACAACCGATAACTG 37.1 10 27436462 diploid Homo sapiens 1000genomes 0 PLUS GCATTTGGAGAAACCCGCAGTGTACAGGGATTGAGAGGGAGAAGGGTTCTGGACGGAtgT[-/GC]cagttatcggttgtgtccaagctcttcttcatcctttttgctggctccatgaacatggat GCATTTGGAGAAACCCGCAGTGTACAGGGATTGAGAGGGAGAAGGGTTCTGGACGGAtgT[-/GC]cagttatcggttgtgtccaagctcttcttcatcctttttgctggctccatgaacatggat 621
exm-IND10-27727540 exm-IND10-27727540-0_M_R_1990486444 exm-IND10-27727540 MINUS [I/D] 6700202 ATTATTTTTCAGATTATGGTCCCAGGGTTATGGTTATTGTTACTAAAAAA 37.1 10 27687535 diploid Homo sapiens 1000genomes 0 PLUS TTCAAAAATTTTAGTACAGTTTTCCAGTTTTTGCCTAACATCTTTATCCCAGTAGTCAAC[-/T]TTTTTTAGTAACAATAACCATAACCCTGGGACCATAATCTGAAAAATAATTCTCCTCTAC TTCAAAAATTTTAGTACAGTTTTCCAGTTTTTGCCTAACATCTTTATCCCAGTAGTCAAC[-/T]TTTTTTAGTAACAATAACCATAACCCTGGGACCATAATCTGAAAAATAATTCTCCTCTAC 621
exm-IND10-74560589 exm-IND10-74560589-0_P_F_1990486573 exm-IND10-74560589 PLUS [D/I] 66776594 GGCCCCTATACTCAGCAACAGAATGGGACTTTCCCATTCTGGCTGCCCCC 37.1 10 74890584 diploid Homo sapiens 1000genomes 0 PLUS GCCCTGAAGAGAAAGGGCCCCTATACTCAGCAACAGAATGGGACTTTCCCATTCTGGCTG[-/C]CCCCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGAGTGGGTGGAAAAACAGACCTGT GCCCTGAAGAGAAAGGGCCCCTATACTCAGCAACAGAATGGGACTTTCCCATTCTGGCTG[-/C]CCCCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGAGTGGGTGGAAAAACAGACCTGT 621
exm-IND11-102094357 exm-IND11-102094357-0_P_F_1990486575 exm-IND11-102094357 PLUS [D/I] 74681191 CCCAGGTCCTACCATGTACTATGACTCTCTTGAGAAGACCTTACCATAGA 37.1 11 102589148 diploid Homo sapiens 1000genomes 0 PLUS GTGTTCGCCTATTCCCAGGTCCTACCATGTACTATGACTCTCTTGAGAAGACCTTACCAT[-/AG]AGATGGCCTGAATGCCATCGATGTCATCTTGAGGGAGTGAGTAGTTGCTGGTTTCCCTGA GTGTTCGCCTATTCCCAGGTCCTACCATGTACTATGACTCTCTTGAGAAGACCTTACCAT[-/AG]AGATGGCCTGAATGCCATCGATGTCATCTTGAGGGAGTGAGTAGTTGCTGGTTTCCCTGA 621
exm-IND11-60867390 exm-IND11-60867390-0_M_R_1990486445 exm-IND11-60867390 MINUS [D/I] 35625203 GCTGACATGAAGGTGCCCACCAGGGCACGGGCAATCTTCACCCCGCGGCC 37.1 11 61110815 diploid Homo sapiens 1000genomes 0 PLUS TGTTTTCTTTCCCTGATGCCCATTTTTCCCTTTTGGACTGCCACACTCTGGTATTGCAGA[-/G]GGCCGCGGGGTGAAGATTGCCCGTGCCCTGGTGGGCACCTTCATGTCAGCACTGGAGATG TGTTTTCTTTCCCTGATGCCCATTTTTCCCTTTTGGACTGCCACACTCTGGTATTGCAGA[-/G]GGCCGCGGGGTGAAGATTGCCCGTGCCCTGGTGGGCACCTTCATGTCAGCACTGGAGATG 621
exm-IND11-73463127 exm-IND11-73463127-0_P_F_1990486580 exm-IND11-73463127 PLUS [I/D] 84623566 GAGACTTCTGGTGGCAGGAGATGACTTCTGGTGGAGAGAGCTGGACCTCA 37.1 11 73785480 diploid Homo sapiens 1000genomes 0 PLUS GTGGAGGCAGGAGACTTCTGGTGGCAGGAGATGACTTCTGGTGGAGAGAGCTGGACCTCA[-/T]CATTCCTTCTGGGGAGCTGCTCAGACTCACTGTGGCTGCTGCAGTCCATGGAGTCCAGCT GTGGAGGCAGGAGACTTCTGGTGGCAGGAGATGACTTCTGGTGGAGAGAGCTGGACCTCA[-/T]CATTCCTTCTGGGGAGCTGCTCAGACTCACTGTGGCTGCTGCAGTCCATGGAGTCCAGCT 621
exm-IND12-4584372 exm-IND12-4584372-0_P_F_1990486581 exm-IND12-4584372 PLUS [I/D] 40692196 CTTACTTTGCCTCCGCAGTATACACGTACATCCAAAGCCGGTTCTACCGA 37.1 12 4714112 diploid Homo sapiens 1000genomes 0 PLUS CGAGGTTTCTCTTACTTTGCCTCCGCAGTATACACGTACATCCAAAGCCGGTTCTACCGA[-/T]CCCCAGAAGTGATCCTGGGCCACCCCTACGACGTGGCCATTGACATGTGGAGCCTGGGCT CGAGGTTTCTCTTACTTTGCCTCCGCAGTATACACGTACATCCAAAGCCGGTTCTACCGA[-/T]CCCCAGAAGTGATCCTGGGCCACCCCTACGACGTGGCCATTGACATGTGGAGCCTGGGCT 621
exm-IND12-46829523 exm-IND12-46829523-0_M_R_1990486450 exm-IND12-46829523 MINUS [I/D] 60769529 CTATGTGAAAAACTGACTGTTCTGTGCTCAGCTCCAGGAACTCTAAAAAC 37.1 12 48543257 diploid Homo sapiens 1000genomes 0 PLUS GCCCTTCACTGCATCGGGGAGATACTGGAGTCCCAGGCTACGGCGCACGGCATAGCGAGC[-/GAGT]GTTTTTAGAGTTCCTGGAGCTGAGCACAGAACAGTCAGTTTTTCACATAGCTGCGGGTCT GCCCTTCACTGCATCGGGGAGATACTGGAGTCCCAGGCTACGGCGCACGGCATAGCGAGC[-/GAGT]GTTTTTAGAGTTCCTGGAGCTGAGCACAGAACAGTCAGTTTTTCACATAGCTGCGGGTCT 621
exm-IND12-49036005 exm-IND12-49036005-0_P_F_1990486582 exm-IND12-49036005 PLUS [I/D] 38775162 AGATCTCGTATTATCTTCAGAGAGAGCTCCTTTTCTGCTTCACTTGTCTC 37.1 12 50749739 diploid Homo sapiens 1000genomes 0 PLUS TTCGTTACTGAGATCTCGTATTATCTTCAGAGAGAGCTCCTTTTCTGCTTCACTTGTCTC[-/AT]GTGCATACACAGTGGAACTTTGGAAGTTAACACATTTTAATTCATCATTTAGCATACTCA TTCGTTACTGAGATCTCGTATTATCTTCAGAGAGAGCTCCTTTTCTGCTTCACTTGTCTC[-/AT]GTGCATACACAGTGGAACTTTGGAAGTTAACACATTTTAATTCATCATTTAGCATACTCA 621
exm-IND12-51232970 exm-IND12-51232970-0_P_F_1990486584 exm-IND12-51232970 PLUS [D/I] 73683858 CCTCCACTCTTCCCGCTGCCACTGGCCACATTGAGGCTCCGGACACCCCC 37.1 12 52946704 diploid Homo sapiens 1000genomes 0 PLUS CGGCCAAATCCATAGCCTCCACTCTTCCCGCTGCCACTGGCCACATTGAGGCTCCGGACA[-/C]CCCCCAGGCTGTAGAGGCTCCGGCTGCCAAAGCCCCCACTGAGCCCTTTGCTCCCTGCCC CGGCCAAATCCATAGCCTCCACTCTTCCCGCTGCCACTGGCCACATTGAGGCTCCGGACA[-/C]CCCCCAGGCTGTAGAGGCTCCGGCTGCCAAAGCCCCCACTGAGCCCTTTGCTCCCTGCCC 621
exm-IND12-54361914 exm-IND12-54361914-0_M_R_1990486452 exm-IND12-54361914 MINUS [I/D] 72716982 TCTTGCTCTCCATCTTGCGGTTGCTCTTGGGAGTCAGCACGGCCATCAGG 37.1 12 56075648 diploid Homo sapiens 1000genomes 0 PLUS TGCCCCTGCACCTCATGGCTCTGCTGGGCTGCTGGCAGCCCCTGTGCAAAAGCTACTTCC[-/CCTA]CCTGATGGCCGTGCTGACTCCCAAGAGCAACCGCAAGATGGAGAGCAAGAAACGGGAGCT TGCCCCTGCACCTCATGGCTCTGCTGGGCTGCTGGCAGCCCCTGTGCAAAAGCTACTTCC[-/CCTA]CCTGATGGCCGTGCTGACTCCCAAGAGCAACCGCAAGATGGAGAGCAAGAAACGGGAGCT 621
exm-IND12-67380833 exm-IND12-67380833-0_P_F_1990486586 exm-IND12-67380833 PLUS [D/I] 69628276 AGTAAAATAGTGAGTCGAGCAACACCTGGACTTCAAAAATTTTCAAAAAC 37.1 12 69094567 diploid Homo sapiens 1000genomes 0 PLUS TGAATATACTGAGTAAAATAGTGAGTCGAGCAACACCTGGACTTCAAAAATTTTCAAAAA[-/C]CAGCCAGTATGCTCTGGCTTCTTCAACAGGAGATGGTCACATGGAGGCTGCTGGCTTCTT TGAATATACTGAGTAAAATAGTGAGTCGAGCAACACCTGGACTTCAAAAATTTTCAAAAA[-/C]CAGCCAGTATGCTCTGGCTTCTTCAACAGGAGATGGTCACATGGAGGCTGCTGGCTTCTT 621
exm-IND12-83947680 exm-IND12-83947680-0_M_R_1990486453 exm-IND12-83947680 MINUS [I/D] 39632233 AAAAAAATAAGCATTGACTTTCTTTTTTTAGGTTCTTGGACTTTTATTCA 37.1 12 85423550 diploid Homo sapiens 1000genomes 0 PLUS TACATACCAAAAGCTGTTAAAAAATTATTTCTATCTAATAAGAGCCATGCACCAAATCCC[-/A]TGAATAAAAGTCCAAGAACCTAAAAAAAGAAAGTCAATGCTTATTTTTTTGTAATTGCCT TACATACCAAAAGCTGTTAAAAAATTATTTCTATCTAATAAGAGCCATGCACCAAATCCC[-/A]TGAATAAAAGTCCAAGAACCTAAAAAAAGAAAGTCAATGCTTATTTTTTTGTAATTGCCT 621
exm-IND12-8887191 exm-IND12-8887191-0_M_R_1990486455 exm-IND12-8887191 MINUS [D/I] 87785930 CCCCGTTTCCCGGTCTCACATAGTAGGAGAAGCTGATCTCTTGGTCAGGG 37.1 12 8995925 diploid Homo sapiens 1000genomes 0 PLUS TTGAAATGTGGCCAGCCCCAGGAAGTGCTGGTGGATTATTACATCGACCCGGCCGATGCA[-/AG]CCCTGACCAAGAGATCAGCTTCTCCTACTATGTGAGACCGGGAAACGGGGACGGGTGAGA TTGAAATGTGGCCAGCCCCAGGAAGTGCTGGTGGATTATTACATCGACCCGGCCGATGCA[-/AG]CCCTGACCAAGAGATCAGCTTCTCCTACTATGTGAGACCGGGAAACGGGGACGGGTGAGA 621
exm-IND13-47565698 exm-IND13-47565698-0_P_F_1990486590 exm-IND13-47565698 PLUS [I/D] 1791442 AACTTCACAGATCACAGAATCAGTACACATAACTACCTCTGAGTGAACAC 37.1 13 48667698 diploid Homo sapiens 1000genomes 0 PLUS GAGACTGACAAACTTCACAGATCACAGAATCAGTACACATAACTACCTCTGAGTGAACAC[-/AT]GAGACCTTTCTGGAAGCCAGTCACACCACCAGAGCAGCTTCATTCTGTGAAGAAGTTCCA GAGACTGACAAACTTCACAGATCACAGAATCAGTACACATAACTACCTCTGAGTGAACAC[-/AT]GAGACCTTTCTGGAAGCCAGTCACACCACCAGAGCAGCTTCATTCTGTGAAGAAGTTCCA 621

Total number of rows: 270241

Table truncated, full table size 116815 Kbytes.




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Supplementary file Size Download File type/resource
GPL26699_platform_Exome_Fine_30K_ExomePlus_15031625_B.xlsx 46.8 Mb (ftp)(http) XLSX

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