Eukaryotic RefSeq Genome Annotation Status

NCBI uses an automated pipeline to provide annotation on some RefSeq genome records. This page provides information about:

Another page shows all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each. If you do not see your genome of interest in these tables, please read the annotation policy and then make an annotation request.

Annotation runs in progress

An annotation run is marked in progress until the data produced is available in the sequence databases, in Gene and on the FTP site.

Species RefSeq assembly(ies) Annotation Release Freeze Date Status
Schistocerca americana (American grasshopper) iqSchAmer2.1 100 2022-01-24 Automated processing in progress
Diprion similis (hymenopterans) iyDipSimi1.1 100 2022-01-18 Automated processing in progress
Marmota monax (woodchuck) Marmota_monax_Labrador192_V1.0 100 2022-01-14 Automated processing in progress
Myxocyprinus asiaticus (Chinese sucker) MX_HiC_50CHRs.fa 100 2022-01-12 Automated processing in progress
Daphnia pulex (common water flea) ASM2113471v1 100 2022-01-06 Automated processing in progress
Scatophagus argus (bony fishes) fScaArg1.pri 100 2022-01-03 Automated processing in progress
Gallus gallus (chicken) bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)

bGalGal1.pat.whiteleghornlayer.GRCg7w
106 2021-12-23 Automated processing in progress

Recently completed annotation runs

Genomes annotated in the past 6 weeks.

Species RefSeq assembly(ies) Annotation Release Freeze Date Release Date Links
Meles meles (Eurasian badger) mMelMel3.1 paternal haplotype (GCF_922984935.1) 100 2022-01-18 2022-01-20 FTP B AR
Trifolium pratense (eudicots) ARS_RC_1.1 (GCF_020283565.1) 100 2022-01-12 2022-01-15 FTP B AR GDV
Mirounga angustirostris (Northern elephant seal) ASM2128878v2 (GCF_021288785.1) 100 2022-01-11 2022-01-14 FTP B AR GDV
Maniola jurtina (meadow brown) ilManJurt1.1 (GCF_905333055.1) 100 2022-01-11 2022-01-14 FTP B AR GDV
Phyllostomus hastatus (greater spear-nosed bat) TTU_PhHast_1.1 (GCF_019186645.2) 100 2022-01-11 2022-01-12 FTP B AR GDV
Ursus americanus (American black bear) gsc_jax_bbear_1.0 (GCF_020975775.1) 100 2022-01-10 2022-01-12 FTP B AR GDV
Papilio machaon (common yellow swallowtail) ilPapMach1.1 (GCF_912999745.1) 101 2022-01-05 2022-01-06 FTP B AR GDV
Pieris brassicae (large cabbage white) ilPieBrab1.1 (GCF_905147105.1) 100 2022-01-04 2022-01-05 FTP B AR GDV
Procambarus clarkii (red swamp crayfish) ASM2042438v2 (GCF_020424385.1) 100 2021-12-30 2022-01-11 FTP B AR GDV
Colias croceus (clouded yellow) ilColCroc2.1 (GCF_905220415.1) 100 2021-12-27 2021-12-29 FTP B AR GDV
Pieris rapae (cabbage white) ilPieRapa1.1 (GCF_905147795.1) 101 2021-12-22 2021-12-29 FTP B AR GDV
Harmonia axyridis (beetles) icHarAxyr1.1 (GCF_914767665.1) 100 2021-12-20 2021-12-25 FTP B AR GDV
Salmo salar (Atlantic salmon) Ssal_v3.1 (GCF_905237065.1) 102 2021-12-15 2022-01-07 FTP B AR GDV
Pipistrellus kuhlii (Kuhl's pipistrelle) mPipKuh1.p (GCF_014108245.1) 101 2021-12-14 2021-12-22 FTP B AR GDV
Melitaea cinxia (Glanville fritillary) ilMelCinx1.1 (GCF_905220565.1) 100 2021-12-13 2021-12-22 FTP B AR GDV
Lemur catta (Ring-tailed lemur) mLemCat1.pri (GCF_020740605.2) 100 2021-12-08 2021-12-21 FTP B AR GDV
Leopardus geoffroyi (Geoffroy's cat) O.geoffroyi_Oge1_pat1.0 (GCF_018350155.1) 100 2021-12-07 2021-12-17 FTP B AR GDV
Camelus bactrianus (Bactrian camel) Ca_bactrianus_MBC_1.0 (GCF_000767855.1) 102 2021-12-06 2021-12-20 FTP B AR GDV

Tables showing all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each, are avaliable here.

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Last updated: 2019-04-12T14:50:38Z