Mus musculus
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Organism Overview ; Genome Assembly and Annotation report
Mus musculus (house mouse)

RefSeq annotation of the mouse reference genome assembly.

Lineage: Eukaryota[8285]; Metazoa[3940]; Chordata[1887]; Craniata[1865]; Vertebrata[1865]; Euteleostomi[1849]; Mammalia[504]; Eutheria[458]; Euarchontoglires[177]; Glires[112]; Rodentia[106]; Myomorpha[61]; Muroidea[58]; Muridae[28]; Murinae[19]; Mus[6]; Mus[4]; Mus musculus[1]

Summary

Submitter: Genome Reference Consortium
Assembly level: Chromosome
Assembly: GCA_000001635.9 GRCm39 scaffolds: 102 contigs: 306 N50: 59,462,871 L50: 15
BioProjects: PRJNA169, PRJNA11777
Statistics: total length (Mb): 2728.22
 protein count: 92499
 GC%: 41.8825

Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
Chr1NC_000067.7CM000994.3195.1541.35,8431352,5622,998639
Chr2NC_000068.8CM000995.3181.7642.27,748-73,3333,759663
Chr3NC_000069.7CM000996.3159.7540.64,1582422,0432,490519
Chr4NC_000070.7CM000997.3156.8642.55,889182,4442,916561
Chr5NC_000071.7CM000998.3151.7642.75,810-92,3042,739468
Chr6NC_000072.7CM000999.3149.5941.64,7002522,0082,879609
Chr7NC_000073.7CM001000.314543.27,6171102,6564,192964
Chr8NC_000074.7CM001001.3130.1342.64,4774872,1312,459421
Chr9NC_000075.7CM001002.3124.3642.95,514-72,1852,528426
Chr10NC_000076.7CM001003.3130.5341.64,357-111,9272,303405
Chr11NC_000077.7CM001004.3121.9744.06,852-452,6303,101427
Chr12NC_000078.7CM001005.3120.0942.03,254231,9942,214554
Chr13NC_000079.7CM001006.3120.8841.92,968-1031,8712,303487
Chr14NC_000080.7CM001007.3125.1441.43,615-131,7952,329513
Chr15NC_000081.7CM001008.3104.0742.23,530-31,6361,813312
Chr16NC_000082.7CM001009.398.0141.22,952131,3281,554288
Chr17NC_000083.7CM001010.395.2943.04,3101121,6702,195474
Chr18NC_000084.7CM001011.390.7241.72,3011-1,1491,351287
Chr19NC_000085.7CM001012.361.4243.12,718-91,0411,380229
ChrXNC_000086.8CM001013.3169.4839.63,4792211,0862,515978
ChrYNC_000087.8CM001014.391.4639.2313--73402103
MTNC_005089.1AY172335.10.0236.713222-37-
Un-.-4.7940.981--3910429

Chromosomes

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