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    Maged2 MAGE family member D2 [ Mus musculus (house mouse) ]

    Gene ID: 80884, updated on 16-Oct-2021

    Summary

    Official Symbol
    Maged2provided by MGI
    Official Full Name
    MAGE family member D2provided by MGI
    Primary source
    MGI:MGI:1933391
    See related
    Ensembl:ENSMUSG00000025268
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ORF1; Mage-d2; 4833439A22Rik
    Expression
    Broad expression in limb E14.5 (RPKM 115.6), placenta adult (RPKM 69.2) and 21 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Maged2 in Genome Data Viewer
    Location:
    X; X F3
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (149589417..149597358, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (150806421..150814362, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (147240964..147248825, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 33991 Neighboring gene predicted gene, 18773 Neighboring gene predicted gene, 24907 Neighboring gene inter-alpha (globulin) inhibitor H5-like, pseudogene Neighboring gene predicted gene, 54086 Neighboring gene polypyrimidine tract binding protein 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in female pregnancy ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in renal sodium ion absorption ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    melanoma-associated antigen D2
    Names
    melanoma antigen, family D, 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199246.2NP_001186175.1  melanoma-associated antigen D2

      See identical proteins and their annotated locations for NP_001186175.1

      Status: VALIDATED

      Source sequence(s)
      BB869272, BC058581
      Consensus CDS
      CCDS30466.1
      UniProtKB/TrEMBL
      Q9ER67
      Related
      ENSMUSP00000108320.2, ENSMUST00000112700.8
      Conserved Domains (3) summary
      PRK13335
      Location:32125
      PRK13335; superantigen-like protein SSL3; Reviewed
      PRK13914
      Location:33224
      PRK13914; invasion associated endopeptidase
      pfam01454
      Location:286454
      MAGE; MAGE family
    2. NM_001358566.1NP_001345495.1  melanoma-associated antigen D2

      Status: VALIDATED

      Source sequence(s)
      AL672282
      Consensus CDS
      CCDS30466.1
      Conserved Domains (3) summary
      PRK13335
      Location:32125
      PRK13335; superantigen-like protein SSL3; Reviewed
      PRK13914
      Location:33224
      PRK13914; invasion associated endopeptidase
      pfam01454
      Location:286454
      MAGE; MAGE family
    3. NM_001358567.1NP_001345496.1  melanoma-associated antigen D2

      Status: VALIDATED

      Source sequence(s)
      AL672282
      Consensus CDS
      CCDS30466.1
      Conserved Domains (3) summary
      PRK13335
      Location:32125
      PRK13335; superantigen-like protein SSL3; Reviewed
      PRK13914
      Location:33224
      PRK13914; invasion associated endopeptidase
      pfam01454
      Location:286454
      MAGE; MAGE family
    4. NM_001358568.1NP_001345497.1  melanoma-associated antigen D2

      Status: VALIDATED

      Source sequence(s)
      AL672282
      Consensus CDS
      CCDS30466.1
      Related
      ENSMUSP00000108317.4, ENSMUST00000112697.10
      Conserved Domains (3) summary
      PRK13335
      Location:32125
      PRK13335; superantigen-like protein SSL3; Reviewed
      PRK13914
      Location:33224
      PRK13914; invasion associated endopeptidase
      pfam01454
      Location:286454
      MAGE; MAGE family
    5. NM_030700.3NP_109625.1  melanoma-associated antigen D2

      See identical proteins and their annotated locations for NP_109625.1

      Status: VALIDATED

      Source sequence(s)
      AJ277114, BP757994, CA752082
      Consensus CDS
      CCDS30466.1
      UniProtKB/TrEMBL
      Q9ER67
      Related
      ENSMUSP00000108319.3, ENSMUST00000112699.9
      Conserved Domains (3) summary
      PRK13335
      Location:32125
      PRK13335; superantigen-like protein SSL3; Reviewed
      PRK13914
      Location:33224
      PRK13914; invasion associated endopeptidase
      pfam01454
      Location:286454
      MAGE; MAGE family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      149589417..149597358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011247882.2XP_011246184.1  melanoma-associated antigen D2 isoform X2

      See identical proteins and their annotated locations for XP_011246184.1

      UniProtKB/TrEMBL
      Q99PB4
      Conserved Domains (3) summary
      PRK13335
      Location:32125
      PRK13335; superantigen-like protein SSL3; Reviewed
      PRK13914
      Location:33224
      PRK13914; invasion associated endopeptidase
      pfam01454
      Location:286454
      MAGE; MAGE family
    2. XM_006528998.5XP_006529061.1  melanoma-associated antigen D2 isoform X1

      See identical proteins and their annotated locations for XP_006529061.1

      UniProtKB/TrEMBL
      Q9ER67
      Conserved Domains (3) summary
      PRK13335
      Location:32125
      PRK13335; superantigen-like protein SSL3; Reviewed
      PRK13914
      Location:33224
      PRK13914; invasion associated endopeptidase
      pfam01454
      Location:286454
      MAGE; MAGE family
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