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    mtmr7a myotubularin related protein 7a [ Danio rerio (zebrafish) ]

    Gene ID: 678558, updated on 16-Oct-2021

    Summary

    Official Symbol
    mtmr7aprovided by ZNC
    Official Full Name
    myotubularin related protein 7aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060421-7754
    See related
    Ensembl:ENSDARG00000037101
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    mtmr7; zgc:136753
    Orthologs
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    Genomic context

    See mtmr7a in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (30398618..30412141)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (30058304..30071827)
    103 previous assembly Zv9 (GCF_000002035.4) 14 NC_007125.5 (31268247..31281770)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene platelet-derived growth factor receptor-like Neighboring gene solute carrier family 7 member 2 Neighboring gene CCR4-NOT transcription complex, subunit 7 Neighboring gene zinc finger DHHC-type palmitoyltransferase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Homology

    Clone Names

    • MGC136753

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatidylinositol phosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatidylinositol-3-phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables phosphatidylinositol-3-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in phosphatidylinositol dephosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within phosphatidylinositol dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    myotubularin-related protein 7a
    Names
    myotubularin related protein 7
    NP_001035406.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001040316.2NP_001035406.1  myotubularin-related protein 7a

      See identical proteins and their annotated locations for NP_001035406.1

      Status: PROVISIONAL

      Source sequence(s)
      BC115252
      UniProtKB/TrEMBL
      Q1RLW5
      Related
      ENSDARP00000053924.5, ENSDART00000053925.6
      Conserved Domains (2) summary
      cd13344
      Location:1103
      PH-GRAM_MTMR7; Myotubularian (MTM) related 7 protein (MTMR7) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:109446
      Myotub-related; Myotubularin-like phosphatase domain

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      30398618..30412141
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394914.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      327036..342204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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