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    OTUD4 OTU deubiquitinase 4 [ Canis lupus familiaris (dog) ]

    Gene ID: 475455, updated on 28-Sep-2021

    Summary

    Official Symbol
    OTUD4provided by VGNC
    Official Full Name
    OTU deubiquitinase 4provided by VGNC
    Primary source
    VGNC:VGNC:44186
    See related
    EnsemblRapid:ENSCAFG00845011956
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
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    Genomic context

    See OTUD4 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (44485491..44530755, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (44208727..44253896, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (44109586..44154745, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (43758510..43803683, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (43845139..43890348, complement)
    105 previous assembly CanFam3.1 (GCF_000002285.3) 15 NC_006597.3 (43816656..43861813, complement)

    Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119869295 Neighboring gene anaphase promoting complex subunit 10 Neighboring gene ATP binding cassette subfamily E member 1 Neighboring gene SMAD family member 1 Neighboring gene uncharacterized LOC119869406

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    OTU domain-containing protein 4
    Names
    OTU domain containing 4
    XP_022259163.1
    XP_022259164.1
    XP_022259165.1
    XP_022259166.1
    XP_022259167.1
    XP_022259168.1
    XP_038352434.1
    XP_038352435.1
    XP_038352436.1
    XP_038352437.1
    XP_038352438.1
    XP_038352439.1
    XP_038352440.1
    XP_038414830.1
    XP_038414831.1
    XP_038414832.1
    XP_038414833.1
    XP_038414834.1
    XP_038414835.1
    XP_038414836.1
    XP_038478755.1
    XP_038478756.1
    XP_038478757.1
    XP_038478758.1
    XP_038478759.1
    XP_038478760.1
    XP_038478761.1
    XP_038544425.1
    XP_038544426.1
    XP_038544427.1
    XP_038544428.1
    XP_038544429.1
    XP_038544430.1
    XP_038544431.1
    XP_532680.3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051819.1 Reference ROS_Cfam_1.0

      Range
      44485491..44530755 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038688499.1XP_038544427.1  OTU domain-containing protein 4 isoform X3

      Conserved Domains (4) summary
      PHA03247
      Location:525873
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8861090
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:257315
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42104
      OTU; OTU-like cysteine protease
    2. XM_038688498.1XP_038544426.1  OTU domain-containing protein 4 isoform X2

      Related
      ENSCAFP00845016746.1, ENSCAFT00845021291.1
      Conserved Domains (4) summary
      PHA03247
      Location:542890
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9031107
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:274332
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42121
      OTU; OTU-like cysteine protease
    3. XM_038688497.1XP_038544425.1  OTU domain-containing protein 4 isoform X1

      Conserved Domains (4) summary
      PHA03247
      Location:563911
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9241128
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:295353
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42142
      OTU; OTU-like cysteine protease
    4. XM_038688503.1XP_038544431.1  OTU domain-containing protein 4 isoform X5

      Conserved Domains (3) summary
      PHA03247
      Location:460808
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8211025
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:192250
      Tudor_SF; Tudor domain superfamily
    5. XM_038688500.1XP_038544428.1  OTU domain-containing protein 4 isoform X4

      Related
      ENSCAFP00845016849.1, ENSCAFT00845021439.1
      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    6. XM_038688502.1XP_038544430.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    7. XM_038688501.1XP_038544429.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049275.1 Alternate UMICH_Zoey_3.1

      Range
      43758510..43803683 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038496508.1XP_038352436.1  OTU domain-containing protein 4 isoform X3

      Conserved Domains (4) summary
      PHA03247
      Location:525873
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8861090
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:257315
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42104
      OTU; OTU-like cysteine protease
    2. XM_038496507.1XP_038352435.1  OTU domain-containing protein 4 isoform X2

      Conserved Domains (4) summary
      PHA03247
      Location:542890
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9031107
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:274332
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42121
      OTU; OTU-like cysteine protease
    3. XM_038496506.1XP_038352434.1  OTU domain-containing protein 4 isoform X1

      Conserved Domains (4) summary
      PHA03247
      Location:563911
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9241128
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:295353
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42142
      OTU; OTU-like cysteine protease
    4. XM_038496512.1XP_038352440.1  OTU domain-containing protein 4 isoform X5

      Conserved Domains (3) summary
      PHA03247
      Location:460808
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8211025
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:192250
      Tudor_SF; Tudor domain superfamily
    5. XM_038496509.1XP_038352437.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    6. XM_038496511.1XP_038352439.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    7. XM_038496510.1XP_038352438.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

      Range
      43845139..43890348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038622829.1XP_038478757.1  OTU domain-containing protein 4 isoform X3

      Conserved Domains (4) summary
      PHA03247
      Location:525873
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8861090
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:257315
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42104
      OTU; OTU-like cysteine protease
    2. XM_038622828.1XP_038478756.1  OTU domain-containing protein 4 isoform X2

      Conserved Domains (4) summary
      PHA03247
      Location:542890
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9031107
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:274332
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42121
      OTU; OTU-like cysteine protease
    3. XM_038622827.1XP_038478755.1  OTU domain-containing protein 4 isoform X1

      Conserved Domains (4) summary
      PHA03247
      Location:563911
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9241128
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:295353
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42142
      OTU; OTU-like cysteine protease
    4. XM_038622833.1XP_038478761.1  OTU domain-containing protein 4 isoform X5

      Conserved Domains (3) summary
      PHA03247
      Location:460808
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8211025
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:192250
      Tudor_SF; Tudor domain superfamily
    5. XM_038622830.1XP_038478758.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    6. XM_038622832.1XP_038478760.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    7. XM_038622831.1XP_038478759.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

      Range
      44109586..44154745 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038558904.1XP_038414832.1  OTU domain-containing protein 4 isoform X3

      Conserved Domains (4) summary
      PHA03247
      Location:525873
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8861090
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:257315
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42104
      OTU; OTU-like cysteine protease
    2. XM_038558903.1XP_038414831.1  OTU domain-containing protein 4 isoform X2

      Conserved Domains (4) summary
      PHA03247
      Location:542890
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9031107
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:274332
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42121
      OTU; OTU-like cysteine protease
    3. XM_038558902.1XP_038414830.1  OTU domain-containing protein 4 isoform X1

      Conserved Domains (4) summary
      PHA03247
      Location:563911
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9241128
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:295353
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42142
      OTU; OTU-like cysteine protease
    4. XM_038558908.1XP_038414836.1  OTU domain-containing protein 4 isoform X5

      Conserved Domains (3) summary
      PHA03247
      Location:460808
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8211025
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:192250
      Tudor_SF; Tudor domain superfamily
    5. XM_038558905.1XP_038414833.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    6. XM_038558907.1XP_038414835.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    7. XM_038558906.1XP_038414834.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      44208727..44253896 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022403456.2XP_022259164.1  OTU domain-containing protein 4 isoform X3

      Conserved Domains (4) summary
      PHA03247
      Location:525873
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8861090
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:257315
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42104
      OTU; OTU-like cysteine protease
    2. XM_532680.7XP_532680.3  OTU domain-containing protein 4 isoform X2

      UniProtKB/TrEMBL
      E2R1A1
      Conserved Domains (4) summary
      PHA03247
      Location:542890
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9031107
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:274332
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42121
      OTU; OTU-like cysteine protease
    3. XM_022403455.2XP_022259163.1  OTU domain-containing protein 4 isoform X1

      Conserved Domains (4) summary
      PHA03247
      Location:563911
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:9241128
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:295353
      Tudor_SF; Tudor domain superfamily
      cl19932
      Location:42142
      OTU; OTU-like cysteine protease
    4. XM_022403460.2XP_022259168.1  OTU domain-containing protein 4 isoform X5

      Conserved Domains (3) summary
      PHA03247
      Location:460808
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8211025
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:192250
      Tudor_SF; Tudor domain superfamily
    5. XM_022403457.2XP_022259165.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    6. XM_022403459.2XP_022259167.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
    7. XM_022403458.2XP_022259166.1  OTU domain-containing protein 4 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:498846
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:8591063
      PRK12678; transcription termination factor Rho; Provisional
      cl02573
      Location:230288
      Tudor_SF; Tudor domain superfamily
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