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    RUFY3 RUN and FYVE domain containing 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 475168, updated on 28-Sep-2021

    Summary

    Official Symbol
    RUFY3provided by VGNC
    Official Full Name
    RUN and FYVE domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:45805
    See related
    EnsemblRapid:ENSCAFG00845010948
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
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    Genomic context

    See RUFY3 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (60813185..60885065)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (59741413..59813528)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (61067046..61138949)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (60427868..60499800)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (59919548..59991670)
    105 previous assembly CanFam3.1 (GCF_000002285.3) 13 NC_006595.3 (60007041..60079198)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119874469 Neighboring gene UTP3 small subunit processome component Neighboring gene uncharacterized LOC106559653 Neighboring gene G-rich RNA sequence binding factor 1 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      60813185..60885065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038685848.1XP_038541776.1  protein RUFY3 isoform X7

      Conserved Domains (2) summary
      TIGR02168
      Location:302503
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:162283
      RUN; RUN domain
    2. XM_038685849.1XP_038541777.1  protein RUFY3 isoform X8

      Related
      ENSCAFP00845015562.1, ENSCAFT00845019869.1
      Conserved Domains (2) summary
      COG1196
      Location:276482
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:121242
      RUN; RUN domain
    3. XM_038685843.1XP_038541771.1  protein RUFY3 isoform X2

      Conserved Domains (3) summary
      COG1196
      Location:297514
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15744
      Location:568615
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121242
      RUN; RUN domain
    4. XM_038685845.1XP_038541773.1  protein RUFY3 isoform X4

      Conserved Domains (2) summary
      TIGR02168
      Location:261523
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:121242
      RUN; RUN domain
    5. XM_038685847.1XP_038541775.1  protein RUFY3 isoform X6

      Conserved Domains (2) summary
      COG1196
      Location:271570
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:121242
      RUN; RUN domain
    6. XM_038685842.1XP_038541770.1  protein RUFY3 isoform X1

      Conserved Domains (3) summary
      TIGR02168
      Location:261523
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:579626
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121242
      RUN; RUN domain
    7. XM_038685850.1XP_038541778.1  protein RUFY3 isoform X9

      Related
      ENSCAFP00845015529.1, ENSCAFT00845019835.1
      Conserved Domains (2) summary
      COG1196
      Location:258464
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:103224
      RUN; RUN domain
    8. XM_038685844.1XP_038541772.1  protein RUFY3 isoform X3

      Related
      ENSCAFP00845015459.1, ENSCAFT00845019754.1
      Conserved Domains (3) summary
      TIGR02168
      Location:243505
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:561608
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:103224
      RUN; RUN domain
    9. XM_038685846.1XP_038541774.1  protein RUFY3 isoform X5

      Related
      ENSCAFP00845015608.1, ENSCAFT00845019925.1
      Conserved Domains (3) summary
      TIGR02168
      Location:213475
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:531578
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:73194
      RUN; RUN domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      60427868..60499800
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038493989.1XP_038349917.1  protein RUFY3 isoform X7

    2. XM_038493988.1XP_038349916.1  protein RUFY3 isoform X15

    3. XM_038493982.1XP_038349910.1  protein RUFY3 isoform X11

    4. XM_038493981.1XP_038349909.1  protein RUFY3 isoform X10

    5. XM_038493990.1XP_038349918.1  protein RUFY3 isoform X8

    6. XM_038493983.1XP_038349911.1  protein RUFY3 isoform X12

    7. XM_038493984.1XP_038349912.1  protein RUFY3 isoform X13

    8. XM_038493985.1XP_038349913.1  protein RUFY3 isoform X1

    9. XM_038493991.1XP_038349919.1  protein RUFY3 isoform X9

    10. XM_038493986.1XP_038349914.1  protein RUFY3 isoform X3

    11. XM_038493987.1XP_038349915.1  protein RUFY3 isoform X14

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

      Range
      59919548..59991670
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038620217.1XP_038476145.1  protein RUFY3 isoform X7

    2. XM_038620216.1XP_038476144.1  protein RUFY3 isoform X21

    3. XM_038620211.1XP_038476139.1  protein RUFY3 isoform X17

    4. XM_038620215.1XP_038476143.1  protein RUFY3 isoform X20

    5. XM_038620218.1XP_038476146.1  protein RUFY3 isoform X8

      Conserved Domains (2) summary
      COG1196
      Location:276482
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:121242
      RUN; RUN domain
    6. XM_038620209.1XP_038476137.1  protein RUFY3 isoform X16

    7. XM_038620210.1XP_038476138.1  protein RUFY3 isoform X1

    8. XM_038620212.1XP_038476140.1  protein RUFY3 isoform X18

    9. XM_038620219.1XP_038476147.1  protein RUFY3 isoform X9

      Conserved Domains (2) summary
      COG1196
      Location:258464
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:103224
      RUN; RUN domain
    10. XM_038620213.1XP_038476141.1  protein RUFY3 isoform X3

    11. XM_038620214.1XP_038476142.1  protein RUFY3 isoform X19

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      61067046..61138949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038556280.1XP_038412208.1  protein RUFY3 isoform X7

      Conserved Domains (2) summary
      TIGR02168
      Location:299500
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:159280
      RUN; RUN domain
    2. XM_038556279.1XP_038412207.1  protein RUFY3 isoform X27

      Conserved Domains (3) summary
      TIGR02168
      Location:179441
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:502549
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:39160
      RUN; RUN domain
    3. XM_038556274.1XP_038412202.1  protein RUFY3 isoform X23

      Conserved Domains (3) summary
      COG1196
      Location:297514
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15744
      Location:573620
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121242
      RUN; RUN domain
    4. XM_038556278.1XP_038412206.1  protein RUFY3 isoform X26

    5. XM_038556281.1XP_038412209.1  protein RUFY3 isoform X8

      Conserved Domains (2) summary
      COG1196
      Location:276482
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:121242
      RUN; RUN domain
    6. XM_038556272.1XP_038412200.1  protein RUFY3 isoform X22

    7. XM_038556273.1XP_038412201.1  protein RUFY3 isoform X1

      Conserved Domains (3) summary
      TIGR02168
      Location:261523
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:579626
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121242
      RUN; RUN domain
    8. XM_038556275.1XP_038412203.1  protein RUFY3 isoform X24

    9. XM_038556282.1XP_038412210.1  protein RUFY3 isoform X9

      Conserved Domains (2) summary
      COG1196
      Location:258464
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:103224
      RUN; RUN domain
    10. XM_038556276.1XP_038412204.1  protein RUFY3 isoform X3

      Conserved Domains (3) summary
      TIGR02168
      Location:243505
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:561608
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:103224
      RUN; RUN domain
    11. XM_038556277.1XP_038412205.1  protein RUFY3 isoform X25

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      59741413..59813528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003431831.5XP_003431879.3  protein RUFY3 isoform X7

      Conserved Domains (2) summary
      TIGR02168
      Location:301502
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:161282
      RUN; RUN domain
    2. XM_022427080.2XP_022282788.2  protein RUFY3 isoform X28

      Conserved Domains (3) summary
      TIGR02168
      Location:179441
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:497544
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:39160
      RUN; RUN domain
    3. XM_038430801.1XP_038286729.1  protein RUFY3 isoform X2

      Conserved Domains (3) summary
      COG1196
      Location:297514
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15744
      Location:568615
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121242
      RUN; RUN domain
    4. XM_014118842.3XP_013974317.1  protein RUFY3 isoform X8

      Conserved Domains (2) summary
      COG1196
      Location:276482
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:121242
      RUN; RUN domain
    5. XM_038430802.1XP_038286730.1  protein RUFY3 isoform X4

      Conserved Domains (2) summary
      TIGR02168
      Location:261523
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:121242
      RUN; RUN domain
    6. XM_038430804.1XP_038286732.1  protein RUFY3 isoform X6

      Conserved Domains (2) summary
      COG1196
      Location:271570
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:121242
      RUN; RUN domain
    7. XM_005628273.4XP_005628330.1  protein RUFY3 isoform X1

      Conserved Domains (3) summary
      TIGR02168
      Location:261523
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:579626
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121242
      RUN; RUN domain
    8. XM_532400.7XP_532400.3  protein RUFY3 isoform X9

      See identical proteins and their annotated locations for XP_532400.3

      Conserved Domains (2) summary
      COG1196
      Location:258464
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:103224
      RUN; RUN domain
    9. XM_857342.6XP_862435.1  protein RUFY3 isoform X3

      Conserved Domains (3) summary
      TIGR02168
      Location:243505
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:561608
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:103224
      RUN; RUN domain
    10. XM_022427084.1XP_022282792.1  protein RUFY3 isoform X5

      Conserved Domains (3) summary
      cd15744
      Location:531578
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:73194
      RUN; RUN domain
      cl25732
      Location:213470
      SMC_N; RecF/RecN/SMC N terminal domain
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