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    ERCC6L2-AS1 ERCC6L2 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 100128782, updated on 23-Nov-2021

    Summary

    Official Symbol
    ERCC6L2-AS1provided by HGNC
    Official Full Name
    ERCC6L2 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:27858
    See related
    Ensembl:ENSG00000175611
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NAG11; NAG12; C9orf130; LINC00476
    Expression
    Ubiquitous expression in prostate (RPKM 1.4), ovary (RPKM 1.4) and 25 other tissues See more
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    Genomic context

    See ERCC6L2-AS1 in Genome Data Viewer
    Location:
    9q22.32
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109.20211119 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (95806088..95875977, complement)
    105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (98568370..98638259, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene proteasome subunit alpha 7 pseudogene 1 Neighboring gene uncharacterized LOC112268049 Neighboring gene uncharacterized LOC105376161 Neighboring gene uncharacterized LOC107987103 Neighboring gene Sharpr-MPRA regulatory region 6609 Neighboring gene RNA, U2 small nuclear 46, pseudogene Neighboring gene ERCC excision repair 6 like 2 Neighboring gene RNA, 5S ribosomal pseudogene 289 Neighboring gene PARK7 pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Markers

    Other Names

    • long intergenic non-protein coding RNA 476
    • nasopharyngeal carcinoma-associated gene 12

    Clone Names

    • FLJ34818, FLJ34826

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_023389.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice site at its 5' end, and includes alternate exon structure at its 3' end, compared to variant 1.
      Source sequence(s)
      AF194971, AL389954
      Related
      ENST00000321517.3
    2. NR_023390.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AK092137, AK092145, AL354861, AL389954, BU687794

    RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

      Range
      95806088..95875977 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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