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    sash1 SAM and SH3 domain containing 1 [ Clupea harengus (Atlantic herring) ]

    Gene ID: 105897792, updated on 8-Apr-2017

    Summary

    Gene symbol
    sash1
    Gene description
    SAM and SH3 domain containing 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Clupea harengus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
    Orthologs

    Genomic context

    See sash1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current ASM96633v1 (GCF_000966335.1) Unplaced Scaffold NW_012220751.1 (579577..798933)

    NW_012220751.1Genomic Context describing neighboring genes Neighboring gene androglobin-like Neighboring gene syntaxin-binding protein 5-like Neighboring gene opsin-5-like Neighboring gene methylmalonyl-CoA mutase

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_012220751.1 Unplaced Scaffold Reference ASM96633v1 Primary Assembly

    General protein information

    Preferred Names
    SAM and SH3 domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM96633v1 Primary Assembly

    Genomic

    1. NW_012220751.1 Reference ASM96633v1 Primary Assembly

      Range
      579577..798933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012824766.1XP_012680220.1  SAM and SH3 domain-containing protein 1 isoform X1

      Conserved Domains (6) summary
      cd09527
      Location:567
      SAM_Samd5; SAM domain of Samd5 subfamily
      smart00454
      Location:667
      SAM; Sterile alpha motif
      cd11967
      Location:700756
      SH3_SASH1; Src homology 3 domain of SAM And SH3 Domain Containing Protein 1
      pfam12485
      Location:547698
      SLY; Lymphocyte signaling adaptor protein
      pfam15547
      Location:10021064
      DUF4654; Domain of unknown function (DUF4654)
      cl15755
      Location:781843
      SAM_superfamily; SAM (Sterile alpha motif )
    2. XM_012824767.1XP_012680221.1  SAM and SH3 domain-containing protein 1 isoform X2

      Conserved Domains (6) summary
      cd09527
      Location:567
      SAM_Samd5; SAM domain of Samd5 subfamily
      smart00454
      Location:667
      SAM; Sterile alpha motif
      cd11967
      Location:675731
      SH3_SASH1; Src homology 3 domain of SAM And SH3 Domain Containing Protein 1
      pfam12485
      Location:555673
      SLY; Lymphocyte signaling adaptor protein
      pfam15547
      Location:9771039
      DUF4654; Domain of unknown function (DUF4654)
      cl15755
      Location:756818
      SAM_superfamily; SAM (Sterile alpha motif )
    3. XM_012824768.1XP_012680222.1  SAM and SH3 domain-containing protein 1 isoform X3

      Conserved Domains (6) summary
      cd09527
      Location:567
      SAM_Samd5; SAM domain of Samd5 subfamily
      smart00454
      Location:667
      SAM; Sterile alpha motif
      cd11967
      Location:674730
      SH3_SASH1; Src homology 3 domain of SAM And SH3 Domain Containing Protein 1
      pfam12485
      Location:521672
      SLY; Lymphocyte signaling adaptor protein
      pfam15547
      Location:9761038
      DUF4654; Domain of unknown function (DUF4654)
      cl15755
      Location:755817
      SAM_superfamily; SAM (Sterile alpha motif )
    4. XM_012824770.1XP_012680224.1  SAM and SH3 domain-containing protein 1 isoform X4

      Conserved Domains (5) summary
      smart00454
      Location:11491206
      SAM; Sterile alpha motif
      cd11967
      Location:570626
      SH3_SASH1; Src homology 3 domain of SAM And SH3 Domain Containing Protein 1
      pfam12485
      Location:417568
      SLY; Lymphocyte signaling adaptor protein
      pfam15547
      Location:872934
      DUF4654; Domain of unknown function (DUF4654)
      cl15755
      Location:651713
      SAM_superfamily; SAM (Sterile alpha motif )
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