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    dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory [ Danio rerio (zebrafish) ]

    Gene ID: 796295, updated on 16-Oct-2021

    Summary

    Official Symbol
    dpm2provided by ZNC
    Official Full Name
    dolichyl-phosphate mannosyltransferase subunit 2, regulatoryprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-9093
    See related
    Ensembl:ENSDARG00000095623
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fa99c01; zgc:112514
    Orthologs
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    Genomic context

    See dpm2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (31714352..31716713, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (31114199..31116560, complement)
    103 previous assembly Zv9 (GCF_000002035.4) 5 NC_007116.5 (33351973..33354328, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene SH3-domain GRB2-like endophilin B2b Neighboring gene uncharacterized LOC101883628 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase-like 1 Neighboring gene family with sequence similarity 102 member Ab Neighboring gene solute carrier family 25 member 25b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Homology

    Clone Names

    • MGC112514

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables enzyme regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables enzyme regulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within dolichol metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within muscle structure development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of dolichol-phosphate-mannose synthase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in integral component of endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    dolichol phosphate-mannose biosynthesis regulatory protein
    Names
    dolichol-phosphate (beta-D) mannosyltransferase 2
    dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit
    NP_001116318.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001122846.2NP_001116318.1  dolichol phosphate-mannose biosynthesis regulatory protein

      See identical proteins and their annotated locations for NP_001116318.1

      Status: VALIDATED

      Source sequence(s)
      CR749745, EH452076
      UniProtKB/TrEMBL
      Q561S6
      Related
      ENSDARP00000119493.1, ENSDART00000131443.2
      Conserved Domains (1) summary
      pfam07297
      Location:580
      DPM2; Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      31714352..31716713 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394585.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      25391..27752 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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