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    Fam110d family with sequence similarity 110, member D [ Mus musculus (house mouse) ]

    Gene ID: 72690, updated on 23-Jun-2021

    Summary

    Official Symbol
    Fam110dprovided by MGI
    Official Full Name
    family with sequence similarity 110, member Dprovided by MGI
    Primary source
    MGI:MGI:1919940
    See related
    Ensembl:ENSMUSG00000050105
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Grrp1; Fam110; 2810043G13Rik
    Expression
    Broad expression in ovary adult (RPKM 9.1), lung adult (RPKM 8.2) and 24 other tissues See more
    Orthologs
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    Genomic context

    See Fam110d in Genome Data Viewer
    Location:
    4; 4 D2.3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (133978413..133993528, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (134251102..134266196, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (133807025..133810021, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA E130218I03 gene Neighboring gene zinc finger protein 593 Neighboring gene predicted gene, 30191 Neighboring gene predicted gene, 42325 Neighboring gene PDLIM1 interacting kinase 1 like Neighboring gene tripartite motif-containing 63

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    protein FAM110D
    Names
    glycine/arginine rich protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099296.2NP_001092766.1  protein FAM110D

      See identical proteins and their annotated locations for NP_001092766.1

      Status: VALIDATED

      Source sequence(s)
      BB578755, BC048704
      Consensus CDS
      CCDS38913.1
      UniProtKB/Swiss-Prot
      Q80X91
      Related
      ENSMUSP00000060143.6, ENSMUST00000060050.6
      Conserved Domains (2) summary
      pfam14160
      Location:141262
      FAM110_C; Centrosome-associated C-terminus
      pfam14161
      Location:1341
      FAM110_N; Centrosome-associated N-terminus

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      133978413..133993528 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036164465.1XP_036020358.1  protein FAM110D isoform X2

      Conserved Domains (2) summary
      pfam14160
      Location:141262
      FAM110_C; Centrosome-associated C-terminus
      pfam14161
      Location:1341
      FAM110_N; Centrosome-associated N-terminus
    2. XM_006539198.4XP_006539261.1  protein FAM110D isoform X2

      See identical proteins and their annotated locations for XP_006539261.1

      UniProtKB/Swiss-Prot
      Q80X91
      Conserved Domains (2) summary
      pfam14160
      Location:141262
      FAM110_C; Centrosome-associated C-terminus
      pfam14161
      Location:1341
      FAM110_N; Centrosome-associated N-terminus
    3. XM_006539199.3XP_006539262.1  protein FAM110D isoform X2

      See identical proteins and their annotated locations for XP_006539262.1

      UniProtKB/Swiss-Prot
      Q80X91
      Conserved Domains (2) summary
      pfam14160
      Location:141262
      FAM110_C; Centrosome-associated C-terminus
      pfam14161
      Location:1341
      FAM110_N; Centrosome-associated N-terminus
    4. XM_036164464.1XP_036020357.1  protein FAM110D isoform X2

      Conserved Domains (2) summary
      pfam14160
      Location:141262
      FAM110_C; Centrosome-associated C-terminus
      pfam14161
      Location:1341
      FAM110_N; Centrosome-associated N-terminus
    5. XM_006539200.3XP_006539263.1  protein FAM110D isoform X2

      See identical proteins and their annotated locations for XP_006539263.1

      UniProtKB/Swiss-Prot
      Q80X91
      Conserved Domains (2) summary
      pfam14160
      Location:141262
      FAM110_C; Centrosome-associated C-terminus
      pfam14161
      Location:1341
      FAM110_N; Centrosome-associated N-terminus
    6. XM_006539197.4XP_006539260.1  protein FAM110D isoform X1

      Conserved Domains (2) summary
      pfam14160
      Location:173294
      FAM110_C; Centrosome-associated C-terminus
      pfam14161
      Location:4573
      FAM110_N; Centrosome-associated N-terminus
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