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VMA6 H(+)-transporting V0 sector ATPase subunit d [ Saccharomyces cerevisiae S288C ]

Gene ID: 851168, updated on 4-Aug-2021

Summary

Gene symbol
VMA6
Gene description
H(+)-transporting V0 sector ATPase subunit d
Primary source
SGD:S000004439
Locus tag
YLR447C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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Genomic context

See VMA6 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (1026856..1027893, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene Gmc2p Neighboring gene hexokinase Neighboring gene ribosomal 60S subunit protein L6B Neighboring gene peptidylprolyl isomerase FPR4

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the VMA6 gene: The VMA6 gene is conserved in human, chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.

Gene Ontology Provided by GO

Process Evidence Code Pubs
involved_in ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in vacuolar acidification IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in vacuolar transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in vacuolar transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in vacuolar transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in fungal-type vacuole membrane HDA PubMed 
is_active_in fungal-type vacuole membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in fungal-type vacuole membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
 
part_of vacuolar proton-transporting V-type ATPase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of vacuolar proton-transporting V-type ATPase, V0 domain TAS
Traceable Author Statement
more info
PubMed 
located_in vacuole IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
H(+)-transporting V0 sector ATPase subunit d
NP_013552.3
  • Subunit d of the V0 integral membrane domain of V-ATPase; part of the electrogenic proton pump found in the endomembrane system; required for V1 domain assembly on the vacuolar membrane; the V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase) has five subunits

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    1026856..1027893 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182335.3NP_013552.3  TPA: H(+)-transporting V0 sector ATPase subunit d [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013552.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P32366
    Conserved Domains (1) summary
    COG1527
    Location:1345
    NtpC; Archaeal/vacuolar-type H+-ATPase subunit C/Vma6 [Energy production and conversion]
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