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mif macrophage migration inhibitory factor [ Danio rerio (zebrafish) ]

Gene ID: 751093, updated on 3-Oct-2019

Summary

Official Symbol
mifprovided by ZNC
Official Full Name
macrophage migration inhibitory factorprovided by ZNC
Primary source
ZFIN:ZDB-GENE-080708-1
See related
Ensembl:ENSDARG00000071336
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Orthologs

Genomic context

See mif in Genome Data Viewer
Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (48964678..48970210)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (49976921..49982453)
103 previous assembly Zv9 (GCF_000002035.4) 14 NC_007125.5 (51224205..51229737)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene si:dkeyp-121d2.7 Neighboring gene short coiled-coil protein b Neighboring gene cleavage and polyadenylation factor I subunit 1 Neighboring gene zinc finger DHHC-type containing 5b

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Process Evidence Code Pubs
auditory receptor cell development IMP
Inferred from Mutant Phenotype
more info
PubMed 
cell proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
embryonic morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
inner ear development IGI
Inferred from Genetic Interaction
more info
PubMed 
negative regulation of apoptotic process IGI
Inferred from Genetic Interaction
more info
PubMed 

General protein information

Preferred Names
macrophage migration inhibitory factor
NP_001036786.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001043321.1NP_001036786.1  macrophage migration inhibitory factor

    See identical proteins and their annotated locations for NP_001036786.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ639953
    UniProtKB/TrEMBL
    Q0ZBR7
    Related
    ENSDARP00000096200.3, ENSDART00000105427.4
    Conserved Domains (1) summary
    cl00235
    Location:2115
    4Oxalocrotonate_Tautomerase; 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one ...

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    48964678..48970210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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