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Fam110d family with sequence similarity 110, member D [ Mus musculus (house mouse) ]

Gene ID: 72690, updated on 23-Jun-2021

Summary

Official Symbol
Fam110dprovided by MGI
Official Full Name
family with sequence similarity 110, member Dprovided by MGI
Primary source
MGI:MGI:1919940
See related
Ensembl:ENSMUSG00000050105
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Grrp1; Fam110; 2810043G13Rik
Expression
Broad expression in ovary adult (RPKM 9.1), lung adult (RPKM 8.2) and 24 other tissues See more
Orthologs
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Genomic context

See Fam110d in Genome Data Viewer
Location:
4; 4 D2.3
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (133978413..133993528, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (134251102..134266196, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (133807025..133810021, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA E130218I03 gene Neighboring gene zinc finger protein 593 Neighboring gene predicted gene, 30191 Neighboring gene predicted gene, 42325 Neighboring gene PDLIM1 interacting kinase 1 like Neighboring gene tripartite motif-containing 63

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
protein FAM110D
Names
glycine/arginine rich protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001099296.2NP_001092766.1  protein FAM110D

    See identical proteins and their annotated locations for NP_001092766.1

    Status: VALIDATED

    Source sequence(s)
    BB578755, BC048704
    Consensus CDS
    CCDS38913.1
    UniProtKB/Swiss-Prot
    Q80X91
    Related
    ENSMUSP00000060143.6, ENSMUST00000060050.6
    Conserved Domains (2) summary
    pfam14160
    Location:141262
    FAM110_C; Centrosome-associated C-terminus
    pfam14161
    Location:1341
    FAM110_N; Centrosome-associated N-terminus

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    133978413..133993528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036164465.1XP_036020358.1  protein FAM110D isoform X2

    Conserved Domains (2) summary
    pfam14160
    Location:141262
    FAM110_C; Centrosome-associated C-terminus
    pfam14161
    Location:1341
    FAM110_N; Centrosome-associated N-terminus
  2. XM_006539198.4XP_006539261.1  protein FAM110D isoform X2

    See identical proteins and their annotated locations for XP_006539261.1

    UniProtKB/Swiss-Prot
    Q80X91
    Conserved Domains (2) summary
    pfam14160
    Location:141262
    FAM110_C; Centrosome-associated C-terminus
    pfam14161
    Location:1341
    FAM110_N; Centrosome-associated N-terminus
  3. XM_006539199.3XP_006539262.1  protein FAM110D isoform X2

    See identical proteins and their annotated locations for XP_006539262.1

    UniProtKB/Swiss-Prot
    Q80X91
    Conserved Domains (2) summary
    pfam14160
    Location:141262
    FAM110_C; Centrosome-associated C-terminus
    pfam14161
    Location:1341
    FAM110_N; Centrosome-associated N-terminus
  4. XM_036164464.1XP_036020357.1  protein FAM110D isoform X2

    Conserved Domains (2) summary
    pfam14160
    Location:141262
    FAM110_C; Centrosome-associated C-terminus
    pfam14161
    Location:1341
    FAM110_N; Centrosome-associated N-terminus
  5. XM_006539200.3XP_006539263.1  protein FAM110D isoform X2

    See identical proteins and their annotated locations for XP_006539263.1

    UniProtKB/Swiss-Prot
    Q80X91
    Conserved Domains (2) summary
    pfam14160
    Location:141262
    FAM110_C; Centrosome-associated C-terminus
    pfam14161
    Location:1341
    FAM110_N; Centrosome-associated N-terminus
  6. XM_006539197.4XP_006539260.1  protein FAM110D isoform X1

    Conserved Domains (2) summary
    pfam14160
    Location:173294
    FAM110_C; Centrosome-associated C-terminus
    pfam14161
    Location:4573
    FAM110_N; Centrosome-associated N-terminus
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