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9130015A21Rik RIKEN cDNA 9130015A21 gene [ Mus musculus (house mouse) ]

Gene ID: 71581, updated on 23-Jun-2021

Summary

Official Symbol
9130015A21Rikprovided by MGI
Official Full Name
RIKEN cDNA 9130015A21 geneprovided by MGI
Primary source
MGI:MGI:1918831
See related
Ensembl:ENSMUSG00000113985
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm4527; 100043575
Expression
Low expression observed in reference dataset See more
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Genomic context

See 9130015A21Rik in Genome Data Viewer
Location:
12; 12 A3
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (35722289..35745117, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (35672290..35695118, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (36356962..36370976, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 26071 Neighboring gene aryl-hydrocarbon receptor Neighboring gene predicted gene, 40388 Neighboring gene predicted gene, 46317

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045050.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) is the longer transcript.
    Source sequence(s)
    AC114412, AK018624, BX518637
    Related
    ENSMUST00000222153.2
  2. NR_045051.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has an alternate 5' sequence, compared to variant 1.
    Source sequence(s)
    AA119165, BX518637
    Related
    ENSMUST00000222894.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    35722289..35745117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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