Format

Send to:

Choose Destination

Echdc3 enoyl Coenzyme A hydratase domain containing 3 [ Mus musculus (house mouse) ]

Gene ID: 67856, updated on 22-Aug-2021

Summary

Official Symbol
Echdc3provided by MGI
Official Full Name
enoyl Coenzyme A hydratase domain containing 3provided by MGI
Primary source
MGI:MGI:1915106
See related
Ensembl:ENSMUSG00000039063
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI662097; 2310005D12Rik
Expression
Biased expression in liver adult (RPKM 51.3), liver E18 (RPKM 34.2) and 13 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Echdc3 in Genome Data Viewer
Location:
2; 2 A1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (6193276..6217805, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (6188465..6212994, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (6109511..6134040, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene proline and serine rich 2 Neighboring gene TRAF-interacting protein pseudogene Neighboring gene predicted gene 10857 Neighboring gene RIKEN cDNA A230108P19 gene Neighboring gene predicted gene, 54100 Neighboring gene predicted gene 13383 Neighboring gene predicted gene, 46730 Neighboring gene USP6 N-terminal like Neighboring gene predicted gene 13388

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables enoyl-CoA hydratase activity ISO
Inferred from Sequence Orthology
more info
 
enables hydro-lyase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cellular response to insulin stimulus ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
enoyl-CoA hydratase domain-containing protein 3, mitochondrial

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024208.4NP_077170.2  enoyl-CoA hydratase domain-containing protein 3, mitochondrial precursor

    See identical proteins and their annotated locations for NP_077170.2

    Status: PROVISIONAL

    Source sequence(s)
    AK009166
    Consensus CDS
    CCDS15672.1
    UniProtKB/Swiss-Prot
    Q9D7J9
    Related
    ENSMUSP00000037371.3, ENSMUST00000042658.5
    Conserved Domains (1) summary
    cl23717
    Location:35299
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    6193276..6217805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center