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Ms4a8a membrane-spanning 4-domains, subfamily A, member 8A [ Mus musculus (house mouse) ]

Gene ID: 64381, updated on 16-Oct-2021

Summary

Official Symbol
Ms4a8aprovided by MGI
Official Full Name
membrane-spanning 4-domains, subfamily A, member 8Aprovided by MGI
Primary source
MGI:MGI:1927657
See related
Ensembl:ENSMUSG00000024730
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ms4a8; CD20L5; AI481240; 2010004L09Rik
Expression
Biased expression in colon adult (RPKM 248.0), large intestine adult (RPKM 219.6) and 3 other tissues See more
Orthologs
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Genomic context

See Ms4a8a in Genome Data Viewer
Location:
19; 19 A
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (11044835..11058467, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (11067471..11081103, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11141961..11155593, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene predicted gene 28347 Neighboring gene expressed sequence AW112010 Neighboring gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 pseudogene Neighboring gene membrane-spanning 4-domains, subfamily A, member 20 Neighboring gene NS1-associated protein 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
membrane-spanning 4-domains subfamily A member 8
Names
CD20 antigen-like 5
MS4a8B protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_022430.2NP_071875.2  membrane-spanning 4-domains subfamily A member 8

    See identical proteins and their annotated locations for NP_071875.2

    Status: VALIDATED

    Source sequence(s)
    AB026044, AK008099, CV305829
    Consensus CDS
    CCDS37921.1
    UniProtKB/Swiss-Prot
    Q99N10
    Related
    ENSMUSP00000025636.7, ENSMUST00000025636.8
    Conserved Domains (1) summary
    pfam04103
    Location:109247
    CD20; CD20-like family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    11044835..11058467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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